Analysis of interatomic Contacts of Structural Units in PDB entry:
4KBQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KBQ entry

There are 4 chains in PDB entry 4KBQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 24ARG 153
B
 SER 23ASN 148
D
 ASP 535ASP 646
C
 ASP 535ASP 646
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4KBQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 39Right-handed alpha
Helix 2
2
A
41 56Right-handed alpha
Helix 3
3
A
59 73Right-handed alpha
Helix 4
4
A
75 90Right-handed alpha
Helix 5
5
A
93 107Right-handed alpha
Helix 6
6
A
109 127Right-handed alpha
Helix 7
7
A
133 148Right-handed alpha
Helix 8
8
B
25 39Right-handed alpha
Helix 9
9
B
41 56Right-handed alpha
Helix 10
10
B
59 73Right-handed alpha
Helix 11
11
B
75 90Right-handed alpha
Helix 12
12
B
93 106Right-handed alpha
Helix 13
13
B
109 128Right-handed alpha
Helix 14
14
B
133 148Right-handed alpha
Helix 15
15
D
536 557Right-handed alpha
Helix 16
16
D
563 583Right-handed alpha
Helix 17
17
D
593 613Right-handed alpha
Helix 18
18
D
614 617Right-handed 310
Helix 19
19
C
536 554Right-handed alpha
Helix 20
20
C
555 559Right-handed 310
Helix 21
21
C
563 584Right-handed alpha
Helix 22
22
C
588 612Right-handed alpha
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There are no sheets in PDB entry 4KBQ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il