Analysis of interatomic Contacts of Structural Units in PDB entry:
4KF7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KF7 entry

There is 1 chain in PDB entry 4KF7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 1149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 4KF7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 19Right-handed alpha
Helix 2
2
A
25 33Right-handed alpha
Helix 3
3
A
38 43Right-handed alpha
Helix 4
4
A
43 51Right-handed alpha
Helix 5
5
A
52 61Right-handed alpha
Helix 6
6
A
62 65Right-handed 310
Helix 7
7
A
70 80Right-handed alpha
Helix 8
8
A
95 110Right-handed alpha
Helix 9
9
A
113 126Right-handed alpha
Helix 10
10
A
127 135Right-handed alpha
Helix 11
11
A
138 150Right-handed alpha
Helix 12
12
A
154 166Right-handed alpha
Helix 13
13
A
170 179Right-handed alpha
Helix 14
14
A
180 211Right-handed alpha
Helix 15
15
A
222 235Right-handed alpha
Helix 16
16
A
245 266Right-handed alpha
Helix 17
17
A
279 306Right-handed alpha
Helix 18
18
A
307 309Right-handed 310
Helix 19
19
A
314 328Right-handed alpha
Helix 20
20
A
329 332Right-handed 310
Helix 21
21
A
338 343Right-handed alpha
Helix 22
22
A
344 361Right-handed alpha
Helix 23
23
A
361 370Right-handed alpha
Helix 24
24
A
381 384Right-handed 310
Helix 25
25
A
385 403Right-handed alpha
Helix 26
26
A
404 406Right-handed 310
Helix 27
27
A
407 444Right-handed alpha
Helix 28
28
A
470 477Right-handed alpha
Helix 29
29
A
483 495Right-handed alpha
Helix 30
30
A
498 510Right-handed alpha
Helix 31
31
A
519 538Right-handed alpha
Helix 32
32
A
544 557Right-handed alpha
Helix 33
33
A
560 564Right-handed 310
Helix 34
34
A
568 572Right-handed 310
Helix 35
35
A
573 575Right-handed 310
Helix 36
36
A
576 585Right-handed alpha
Helix 37
37
A
585 592Right-handed alpha
Helix 38
38
A
592 598Right-handed alpha
Helix 39
39
A
604 618Right-handed alpha
Helix 40
40
A
621 634Right-handed alpha
Helix 41
41
A
643 647Right-handed 310
Helix 42
42
A
712 726Right-handed alpha
Helix 43
43
A
738 760Right-handed alpha
Helix 44
44
A
766 775Right-handed alpha
Helix 45
45
A
784 800Right-handed alpha
Helix 46
46
A
805 823Right-handed alpha
Helix 47
47
A
826 837Right-handed alpha
Helix 48
48
A
848 856Right-handed alpha
Helix 49
49
A
860 884Right-handed alpha
Helix 50
50
A
908 930Right-handed alpha
Helix 51
51
A
937 958Right-handed alpha
Helix 52
52
A
975 988Right-handed alpha
Helix 53
53
A
996 1007Right-handed alpha
Helix 54
54
A
1015 1043Right-handed alpha
Helix 55
55
A
1047 1062Right-handed alpha
Helix 56
56
A
1063 1067Right-handed 310
Helix 57
57
A
1068 1070Right-handed 310
Helix 58
58
A
1071 1087Right-handed alpha
Helix 59
59
A
1095 1101Right-handed alpha
Helix 60
60
A
1101 1117Right-handed alpha
Helix 61
61
A
1121 1138Right-handed alpha
Helix 62
62
A
1140 1147Right-handed alpha
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There are 3 sheets in PDB entry 4KF7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
638 641first strand
Strand 2
A
704 707anti-parallel
Strand 3
A
694 697anti-parallel
Strand 4
A
661 664anti-parallel
Strand 5
A
650 651anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
668 669first strand
Strand 2
A
688 689anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
671 673first strand
Strand 2
A
730 732anti-parallel
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