Analysis of interatomic Contacts of Structural Units in PDB entry:
4KK7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KK7 entry

There is 1 chain in PDB entry 4KK7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 74LEU 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 4KK7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
97 106Right-handed alpha
Helix 2
2
A
115 122Right-handed 310
Helix 3
3
A
210 217Right-handed alpha
Helix 4
4
A
229 236Right-handed alpha
Helix 5
5
A
290 301Right-handed alpha
Helix 6
6
A
312 317Right-handed alpha
Helix 7
7
A
371 376Right-handed 310
Helix 8
8
A
422 429Right-handed alpha
Helix 9
9
A
438 443Right-handed alpha
Helix 10
10
A
452 457Right-handed alpha
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There are 6 sheets in PDB entry 4KK7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
84 88anti-parallel
Strand 3
A
75 78anti-parallel
Strand 4
A
112 114parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 180first strand
Strand 2
A
358 364anti-parallel
Strand 3
A
343 350anti-parallel
Strand 4
A
145 154anti-parallel
Strand 5
A
162 169anti-parallel
Strand 6
A
386 389parallel
Strand 7
A
378 379anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 206first strand
Strand 2
A
194 199anti-parallel
Strand 3
A
185 191anti-parallel
Strand 4
A
226 227parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 206first strand
Strand 2
A
194 199anti-parallel
Strand 3
A
185 191anti-parallel
Strand 4
A
334 335parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 311first strand
Strand 2
A
267 272parallel
Strand 3
A
275 282anti-parallel
Strand 4
A
285 289anti-parallel
Strand 5
A
321 322parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 420first strand
Strand 2
A
404 411anti-parallel
Strand 3
A
393 400anti-parallel
Strand 4
A
435 436parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il