Analysis of interatomic Contacts of Structural Units in PDB entry:
4KKM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KKM entry

There are 2 chains in PDB entry 4KKM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 295
B
 MET 1VAL 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 4KKM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 24Right-handed alpha
Helix 2
2
A
31 43Right-handed alpha
Helix 3
3
A
48 59Right-handed alpha
Helix 4
4
A
64 88Right-handed alpha
Helix 5
5
A
102 107Right-handed alpha
Helix 6
6
A
108 129Right-handed alpha
Helix 7
7
A
135 151Right-handed alpha
Helix 8
8
A
154 167Right-handed alpha
Helix 9
9
A
173 185Right-handed alpha
Helix 10
10
A
185 200Right-handed alpha
Helix 11
11
A
203 229Right-handed alpha
Helix 12
12
A
251 257Right-handed alpha
Helix 13
13
A
257 276Right-handed alpha
Helix 14
14
A
280 282Right-handed 310
Helix 15
15
A
283 293Right-handed alpha
Helix 16
16
B
1 24Right-handed alpha
Helix 17
17
B
31 43Right-handed alpha
Helix 18
18
B
48 59Right-handed alpha
Helix 19
19
B
64 88Right-handed alpha
Helix 20
20
B
102 107Right-handed alpha
Helix 21
21
B
108 129Right-handed alpha
Helix 22
22
B
135 151Right-handed alpha
Helix 23
23
B
154 167Right-handed alpha
Helix 24
24
B
173 185Right-handed alpha
Helix 25
25
B
185 200Right-handed alpha
Helix 26
26
B
203 232Right-handed alpha
Helix 27
27
B
251 257Right-handed alpha
Helix 28
28
B
257 275Right-handed alpha
Helix 29
29
B
280 282Right-handed 310
Helix 30
30
B
283 293Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4KKM.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 97first strand
Strand 2
B
100 101anti-parallel
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