Analysis of interatomic Contacts of Structural Units in PDB entry:
4KKV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KKV entry

There is 1 chain in PDB entry 4KKV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -3LYS 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4KKV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 19Right-handed alpha
Helix 2
2
A
26 46Right-handed alpha
Helix 3
3
A
64 83Right-handed alpha
Helix 4
4
A
114 128Right-handed alpha
Helix 5
5
A
142 154Right-handed alpha
Helix 6
6
A
197 209Right-handed alpha
Helix 7
7
A
213 219Right-handed 310
Helix 8
8
A
232 236Right-handed 310
Helix 9
9
A
248 254Right-handed alpha
Helix 10
10
A
270 279Right-handed alpha
Helix 11
11
A
286 290Right-handed 310
Helix 12
12
A
292 296Right-handed 310
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There is 1 sheet ( A) in PDB entry 4KKV.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 134first strand
Strand 2
A
103 107parallel
Strand 3
A
57 60parallel
Strand 4
A
159 162parallel
Strand 5
A
188 190parallel
Strand 6
A
177 179anti-parallel
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