Analysis of interatomic Contacts of Structural Units in PDB entry:
4KL0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KL0 entry

There is 1 chain in PDB entry 4KL0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 88VAL 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4KL0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
90 102Right-handed alpha
Helix 2
2
A
121 136Right-handed alpha
Helix 3
3
A
150 168Right-handed alpha
Helix 4
4
A
184 192Right-handed alpha
Helix 5
5
A
195 202Right-handed 310
Helix 6
6
A
204 208Right-handed 310
Helix 7
7
A
213 223Right-handed alpha
Helix 8
8
A
235 245Right-handed alpha
Helix 9
9
A
245 252Right-handed alpha
Helix 10
10
A
278 284Right-handed alpha
Helix 11
11
A
284 298Right-handed alpha
Helix 12
12
A
306 313Right-handed alpha
Helix 13
13
A
316 325Right-handed alpha
Helix 14
14
A
328 351Right-handed alpha
Helix 15
15
A
358 367Right-handed alpha
Helix 16
16
A
384 389Right-handed alpha
Helix 17
17
A
390 392Right-handed 310
Helix 18
18
A
397 407Right-handed alpha
Helix 19
19
A
407 415Right-handed alpha
Helix 20
20
A
438 454Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4KL0.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
174 177first strand
Strand 2
A
139 146parallel
Strand 3
A
109 115parallel
Strand 4
A
227 231parallel
Strand 5
A
253 259parallel
Strand 6
A
302 305parallel
Strand 7
A
428 431parallel
Strand 8
A
418 419anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il