Analysis of interatomic Contacts of Structural Units in PDB entry:
4KMO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KMO entry

There are 2 chains in PDB entry 4KMO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5GLU 657
B
 ARG 520ARG 791
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 4KMO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 27Right-handed alpha
Helix 2
2
A
36 47Right-handed alpha
Helix 3
3
A
48 54Right-handed alpha
Helix 4
4
A
64 66Right-handed 310
Helix 5
5
A
83 99Right-handed alpha
Helix 6
6
A
116 125Right-handed alpha
Helix 7
7
A
155 162Right-handed alpha
Helix 8
8
A
166 184Right-handed alpha
Helix 9
9
A
193 210Right-handed alpha
Helix 10
10
A
239 241Right-handed 310
Helix 11
11
A
242 247Right-handed alpha
Helix 12
12
A
251 260Right-handed alpha
Helix 13
13
A
306 313Right-handed alpha
Helix 14
14
A
316 318Right-handed 310
Helix 15
15
A
319 333Right-handed alpha
Helix 16
16
A
358 379Right-handed alpha
Helix 17
17
A
380 396Right-handed alpha
Helix 18
18
A
398 401Right-handed 310
Helix 19
19
A
402 412Right-handed alpha
Helix 20
20
A
415 430Right-handed alpha
Helix 21
21
A
434 450Right-handed alpha
Helix 22
22
A
453 463Right-handed alpha
Helix 23
23
A
491 499Right-handed alpha
Helix 24
24
A
513 519Right-handed 310
Helix 25
25
A
523 534Right-handed alpha
Helix 26
26
A
534 541Right-handed alpha
Helix 27
27
A
565 570Right-handed alpha
Helix 28
28
A
613 627Right-handed alpha
Helix 29
29
A
642 649Right-handed alpha
Helix 30
30
B
521 525Right-handed alpha
Helix 31
31
B
535 542Right-handed alpha
Helix 32
32
B
546 556Right-handed alpha
Helix 33
33
B
557 572Right-handed alpha
Helix 34
34
B
573 583Right-handed alpha
Helix 35
35
B
584 596Right-handed alpha
Helix 36
36
B
606 616Right-handed alpha
Helix 37
37
B
618 631Right-handed alpha
Helix 38
38
B
635 651Right-handed alpha
Helix 39
39
B
657 682Right-handed alpha
Helix 40
40
B
689 700Right-handed alpha
Helix 41
41
B
704 713Right-handed alpha
Helix 42
42
B
716 730Right-handed alpha
Helix 43
43
B
733 741Right-handed alpha
Helix 44
44
B
750 759Right-handed alpha
Helix 45
45
B
762 767Right-handed alpha
Helix 46
46
B
781 788Right-handed alpha
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There are 3 sheets in PDB entry 4KMO. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 62first strand
Strand 2
A
31 35parallel
Strand 3
A
74 80parallel
Strand 4
A
106 112parallel
Strand 5
A
133 136parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 145first strand
Strand 2
A
148 150anti-parallel
Strand 3
A
631 637parallel
Strand 4
A
602 609parallel
Strand 5
A
230 237parallel
Strand 6
A
188 192parallel
Strand 7
A
576 580anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 269first strand
Strand 2
A
298 301anti-parallel
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