Analysis of interatomic Contacts of Structural Units in PDB entry:
4KVG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KVG entry

There are 4 chains in PDB entry 4KVG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0ARG 167
B
 MET 178ALA 437
C
 MET 1ASN 166
D
 MET 178ALA 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4KVG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 26Right-handed alpha
Helix 2
2
A
66 75Right-handed alpha
Helix 3
3
A
86 92Right-handed alpha
Helix 4
4
A
92 105Right-handed alpha
Helix 5
5
A
120 124Right-handed 310
Helix 6
6
A
127 138Right-handed alpha
Helix 7
7
A
153 167Right-handed alpha
Helix 8
8
B
202 215Right-handed alpha
Helix 9
9
B
242 248Right-handed alpha
Helix 10
10
B
267 272Right-handed alpha
Helix 11
11
B
273 276Right-handed 310
Helix 12
12
B
294 307Right-handed alpha
Helix 13
13
B
363 365Right-handed 310
Helix 14
14
B
372 378Right-handed alpha
Helix 15
15
B
406 423Right-handed alpha
Helix 16
16
B
423 435Right-handed alpha
Helix 17
17
C
15 26Right-handed alpha
Helix 18
18
C
69 75Right-handed alpha
Helix 19
19
C
86 92Right-handed alpha
Helix 20
20
C
92 105Right-handed alpha
Helix 21
21
C
120 124Right-handed 310
Helix 22
22
C
127 138Right-handed alpha
Helix 23
23
C
153 166Right-handed alpha
Helix 24
24
D
202 215Right-handed alpha
Helix 25
25
D
242 248Right-handed alpha
Helix 26
26
D
267 272Right-handed alpha
Helix 27
27
D
273 276Right-handed 310
Helix 28
28
D
294 307Right-handed alpha
Helix 29
29
D
363 365Right-handed 310
Helix 30
30
D
372 378Right-handed alpha
Helix 31
31
D
406 423Right-handed alpha
Helix 32
32
D
423 435Right-handed alpha
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There are 2 sheets in PDB entry 4KVG. Click on sheet of interest to get list of strands forming it: A, B,

There are 18 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 145first strand
Strand 2
A
111 116parallel
Strand 3
A
77 83parallel
Strand 4
A
2 9parallel
Strand 5
A
49 58parallel
Strand 6
A
37 46anti-parallel
Strand 7
B
192 198anti-parallel
Strand 8
B
180 187anti-parallel
Strand 9
B
257 262parallel
Strand 10
B
222 228anti-parallel
Strand 11
B
233 236anti-parallel
Strand 12
B
366 370anti-parallel
Strand 13
B
384 388anti-parallel
Strand 14
B
400 403anti-parallel
Strand 15
B
317 323anti-parallel
Strand 16
B
330 337anti-parallel
Strand 17
B
341 344anti-parallel
Strand 18
B
357 361anti-parallel
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There are 18 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
142 145first strand
Strand 2
C
111 116parallel
Strand 3
C
77 83parallel
Strand 4
C
2 10parallel
Strand 5
C
49 58parallel
Strand 6
C
37 46anti-parallel
Strand 7
D
192 198anti-parallel
Strand 8
D
180 186anti-parallel
Strand 9
D
257 262parallel
Strand 10
D
222 228anti-parallel
Strand 11
D
233 236anti-parallel
Strand 12
D
366 370anti-parallel
Strand 13
D
384 388anti-parallel
Strand 14
D
400 403anti-parallel
Strand 15
D
317 323anti-parallel
Strand 16
D
330 337anti-parallel
Strand 17
D
341 345anti-parallel
Strand 18
D
358 361anti-parallel
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