Analysis of interatomic Contacts of Structural Units in PDB entry:
4KVM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KVM entry

There are 2 chains in PDB entry 4KVM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 5ALA 731
B
 MET 1ASP 529
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are204 helices in PDB entry 4KVM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 23Right-handed alpha
Helix 2
2
A
25 32Right-handed alpha
Helix 3
3
A
33 37Right-handed 310
Helix 4
4
A
43 57Right-handed alpha
Helix 5
5
A
60 72Right-handed alpha
Helix 6
6
A
77 91Right-handed alpha
Helix 7
7
A
93 108Right-handed alpha
Helix 8
8
A
111 125Right-handed alpha
Helix 9
9
A
127 142Right-handed alpha
Helix 10
10
A
145 159Right-handed alpha
Helix 11
11
A
161 175Right-handed alpha
Helix 12
12
A
184 202Right-handed alpha
Helix 13
13
A
202 215Right-handed alpha
Helix 14
14
A
216 218Right-handed 310
Helix 15
15
A
220 235Right-handed alpha
Helix 16
16
A
237 252Right-handed alpha
Helix 17
17
A
256 266Right-handed alpha
Helix 18
18
A
277 288Right-handed alpha
Helix 19
19
A
296 301Right-handed alpha
Helix 20
20
A
301 306Right-handed alpha
Helix 21
21
A
307 325Right-handed alpha
Helix 22
22
A
329 335Right-handed alpha
Helix 23
23
A
336 340Right-handed 310
Helix 24
24
A
342 356Right-handed alpha
Helix 25
25
A
366 370Right-handed 310
Helix 26
26
A
377 394Right-handed alpha
Helix 27
27
A
396 410Right-handed alpha
Helix 28
28
A
413 428Right-handed alpha
Helix 29
29
A
429 443Right-handed alpha
Helix 30
30
A
447 461Right-handed alpha
Helix 31
31
A
463 472Right-handed alpha
Helix 32
32
A
481 490Right-handed alpha
Helix 33
33
A
492 506Right-handed alpha
Helix 34
34
A
508 530Right-handed alpha
Helix 35
35
A
532 541Right-handed alpha
Helix 36
36
A
542 554Right-handed alpha
Helix 37
37
A
559 579Right-handed alpha
Helix 38
38
A
581 585Right-handed 310
Helix 39
39
A
587 597Right-handed alpha
Helix 40
40
A
600 631Right-handed alpha
Helix 41
41
A
657 667Right-handed alpha
Helix 42
42
A
669 673Right-handed 310
Helix 43
43
A
677 690Right-handed alpha
Helix 44
44
A
692 706Right-handed alpha
Helix 45
45
A
711 726Right-handed alpha
Helix 46
46
B
7 23Right-handed alpha
Helix 47
47
B
26 38Right-handed alpha
Helix 48
48
B
43 57Right-handed alpha
Helix 49
49
B
60 74Right-handed alpha
Helix 50
50
B
77 91Right-handed alpha
Helix 51
51
B
93 107Right-handed alpha
Helix 52
52
B
111 125Right-handed alpha
Helix 53
53
B
127 142Right-handed alpha
Helix 54
54
B
145 159Right-handed alpha
Helix 55
55
B
161 175Right-handed alpha
Helix 56
56
B
184 202Right-handed alpha
Helix 57
57
B
202 215Right-handed alpha
Helix 58
58
B
216 218Right-handed 310
Helix 59
59
B
220 235Right-handed alpha
Helix 60
60
B
237 252Right-handed alpha
Helix 61
61
B
256 266Right-handed alpha
Helix 62
62
B
277 288Right-handed alpha
Helix 63
63
B
296 301Right-handed alpha
Helix 64
64
B
301 306Right-handed alpha
Helix 65
65
B
307 325Right-handed alpha
Helix 66
66
B
329 335Right-handed alpha
Helix 67
67
B
336 340Right-handed 310
Helix 68
68
B
342 356Right-handed alpha
Helix 69
69
B
366 370Right-handed 310
Helix 70
70
B
377 394Right-handed alpha
Helix 71
71
B
396 410Right-handed alpha
Helix 72
72
B
413 427Right-handed alpha
Helix 73
73
B
429 443Right-handed alpha
Helix 74
74
B
447 461Right-handed alpha
Helix 75
75
B
463 472Right-handed alpha
Helix 76
76
B
481 490Right-handed alpha
Helix 77
77
B
492 506Right-handed alpha
Helix 78
78
B
508 530Right-handed alpha
Helix 79
79
B
532 541Right-handed alpha
Helix 80
80
B
542 554Right-handed alpha
Helix 81
81
B
559 579Right-handed alpha
Helix 82
82
B
581 585Right-handed 310
Helix 83
83
B
587 597Right-handed alpha
Helix 84
84
B
600 631Right-handed alpha
Helix 85
85
B
657 668Right-handed alpha
Helix 86
86
B
669 673Right-handed 310
Helix 87
87
B
677 690Right-handed alpha
Helix 88
88
B
692 706Right-handed alpha
Helix 89
89
B
711 726Right-handed alpha
Helix 90
90
C
7 12Right-handed alpha
Helix 91
91
C
14 23Right-handed alpha
Helix 92
92
C
26 38Right-handed alpha
Helix 93
93
C
43 57Right-handed alpha
Helix 94
94
C
60 71Right-handed alpha
Helix 95
95
C
77 91Right-handed alpha
Helix 96
96
C
93 108Right-handed alpha
Helix 97
97
C
111 126Right-handed alpha
Helix 98
98
C
127 142Right-handed alpha
Helix 99
99
C
145 159Right-handed alpha
Helix 100
100
C
161 175Right-handed alpha
Helix 101
101
C
184 202Right-handed alpha
Helix 102
102
C
202 215Right-handed alpha
Helix 103
103
C
216 218Right-handed 310
Helix 104
104
C
220 235Right-handed alpha
Helix 105
105
C
237 252Right-handed alpha
Helix 106
106
C
256 266Right-handed alpha
Helix 107
107
C
277 288Right-handed alpha
Helix 108
108
C
296 301Right-handed alpha
Helix 109
109
C
301 306Right-handed alpha
Helix 110
110
C
307 325Right-handed alpha
Helix 111
111
C
329 335Right-handed alpha
Helix 112
112
C
336 340Right-handed 310
Helix 113
113
C
342 356Right-handed alpha
Helix 114
114
C
366 371Right-handed 310
Helix 115
115
C
377 394Right-handed alpha
Helix 116
116
C
396 410Right-handed alpha
Helix 117
117
C
413 428Right-handed alpha
Helix 118
118
C
429 443Right-handed alpha
Helix 119
119
C
447 461Right-handed alpha
Helix 120
120
C
463 472Right-handed alpha
Helix 121
121
C
481 490Right-handed alpha
Helix 122
122
C
492 506Right-handed alpha
Helix 123
123
C
508 530Right-handed alpha
Helix 124
124
C
532 541Right-handed alpha
Helix 125
125
C
542 554Right-handed alpha
Helix 126
126
C
559 579Right-handed alpha
Helix 127
127
C
581 585Right-handed 310
Helix 128
128
C
587 597Right-handed alpha
Helix 129
129
C
600 631Right-handed alpha
Helix 130
130
C
657 667Right-handed alpha
Helix 131
131
C
669 673Right-handed 310
Helix 132
132
C
677 690Right-handed alpha
Helix 133
133
C
692 706Right-handed alpha
Helix 134
134
C
711 726Right-handed alpha
Helix 135
135
D
7 23Right-handed alpha
Helix 136
136
D
25 38Right-handed alpha
Helix 137
137
D
43 57Right-handed alpha
Helix 138
138
D
61 74Right-handed alpha
Helix 139
139
D
78 91Right-handed alpha
Helix 140
140
D
93 108Right-handed alpha
Helix 141
141
D
111 126Right-handed alpha
Helix 142
142
D
127 142Right-handed alpha
Helix 143
143
D
145 159Right-handed alpha
Helix 144
144
D
161 175Right-handed alpha
Helix 145
145
D
184 215Right-handed alpha
Helix 146
146
D
216 218Right-handed 310
Helix 147
147
D
220 235Right-handed alpha
Helix 148
148
D
237 252Right-handed alpha
Helix 149
149
D
256 266Right-handed alpha
Helix 150
150
D
277 288Right-handed alpha
Helix 151
151
D
296 306Right-handed alpha
Helix 152
152
D
307 325Right-handed alpha
Helix 153
153
D
329 335Right-handed alpha
Helix 154
154
D
336 341Right-handed 310
Helix 155
155
D
342 356Right-handed alpha
Helix 156
156
D
366 371Right-handed 310
Helix 157
157
D
377 394Right-handed alpha
Helix 158
158
D
396 410Right-handed alpha
Helix 159
159
D
413 428Right-handed alpha
Helix 160
160
D
429 443Right-handed alpha
Helix 161
161
D
447 461Right-handed alpha
Helix 162
162
D
463 472Right-handed alpha
Helix 163
163
D
481 490Right-handed alpha
Helix 164
164
D
492 506Right-handed alpha
Helix 165
165
D
508 530Right-handed alpha
Helix 166
166
D
532 541Right-handed alpha
Helix 167
167
D
542 554Right-handed alpha
Helix 168
168
D
559 579Right-handed alpha
Helix 169
169
D
581 585Right-handed 310
Helix 170
170
D
587 597Right-handed alpha
Helix 171
171
D
600 631Right-handed alpha
Helix 172
172
D
657 667Right-handed alpha
Helix 173
173
D
669 673Right-handed 310
Helix 174
174
D
677 690Right-handed alpha
Helix 175
175
D
692 706Right-handed alpha
Helix 176
176
D
711 726Right-handed alpha
Helix 177
177
E
7 9Right-handed 310
Helix 178
178
E
10 22Right-handed alpha
Helix 179
179
E
27 38Right-handed alpha
Helix 180
180
E
64 68Right-handed 310
Helix 181
181
E
80 83Right-handed 310
Helix 182
182
E
86 104Right-handed alpha
Helix 183
183
E
116 124Right-handed alpha
Helix 184
184
F
7 9Right-handed 310
Helix 185
185
F
10 22Right-handed alpha
Helix 186
186
F
27 38Right-handed alpha
Helix 187
187
F
64 68Right-handed 310
Helix 188
188
F
80 83Right-handed 310
Helix 189
189
F
86 104Right-handed alpha
Helix 190
190
F
116 124Right-handed alpha
Helix 191
191
G
7 9Right-handed 310
Helix 192
192
G
10 22Right-handed alpha
Helix 193
193
G
27 38Right-handed alpha
Helix 194
194
G
64 68Right-handed 310
Helix 195
195
G
80 83Right-handed 310
Helix 196
196
G
86 104Right-handed alpha
Helix 197
197
G
116 124Right-handed alpha
Helix 198
198
H
7 9Right-handed 310
Helix 199
199
H
10 22Right-handed alpha
Helix 200
200
H
27 38Right-handed alpha
Helix 201
201
H
64 68Right-handed 310
Helix 202
202
H
80 83Right-handed 310
Helix 203
203
H
86 104Right-handed alpha
Helix 204
204
H
116 124Right-handed alpha
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There are 4 sheets in PDB entry 4KVM. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 5first strand
Strand 2
E
43 46anti-parallel
Strand 3
E
52 60anti-parallel
Strand 4
E
71 78anti-parallel
Strand 5
E
107 113parallel
Strand 6
E
145 151anti-parallel
Strand 7
E
130 135anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
2 5first strand
Strand 2
F
43 46anti-parallel
Strand 3
F
52 60anti-parallel
Strand 4
F
71 78anti-parallel
Strand 5
F
107 113parallel
Strand 6
F
145 151anti-parallel
Strand 7
F
130 135anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
2 5first strand
Strand 2
G
43 46anti-parallel
Strand 3
G
52 60anti-parallel
Strand 4
G
71 78anti-parallel
Strand 5
G
107 113parallel
Strand 6
G
145 151anti-parallel
Strand 7
G
130 135anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
2 5first strand
Strand 2
H
43 46anti-parallel
Strand 3
H
52 60anti-parallel
Strand 4
H
70 78anti-parallel
Strand 5
H
107 113parallel
Strand 6
H
145 151anti-parallel
Strand 7
H
130 135anti-parallel
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