Analysis of interatomic Contacts of Structural Units in PDB entry:
4KWW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KWW entry

There are 6 chains in PDB entry 4KWW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2PHE 286
B
 ASP 2PHE 286
C
 ASP 2PHE 286
D
 ALA 3PHE 286
E
 ALA 3PHE 286
F
 ASP 2PHE 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 4KWW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 10Right-handed 310
Helix 2
2
A
11 27Right-handed alpha
Helix 3
3
A
33 38Right-handed alpha
Helix 4
4
A
56 67Right-handed alpha
Helix 5
5
A
94 128Right-handed alpha
Helix 6
6
A
144 155Right-handed alpha
Helix 7
7
A
171 179Right-handed alpha
Helix 8
8
A
180 192Right-handed alpha
Helix 9
9
A
204 214Right-handed alpha
Helix 10
10
A
225 240Right-handed alpha
Helix 11
11
A
255 260Right-handed alpha
Helix 12
12
A
270 275Right-handed alpha
Helix 13
13
B
2 10Right-handed 310
Helix 14
14
B
11 27Right-handed alpha
Helix 15
15
B
33 38Right-handed alpha
Helix 16
16
B
56 67Right-handed alpha
Helix 17
17
B
94 128Right-handed alpha
Helix 18
18
B
144 155Right-handed alpha
Helix 19
19
B
171 179Right-handed alpha
Helix 20
20
B
180 192Right-handed alpha
Helix 21
21
B
204 214Right-handed alpha
Helix 22
22
B
225 240Right-handed alpha
Helix 23
23
B
255 260Right-handed alpha
Helix 24
24
B
270 275Right-handed alpha
Helix 25
25
C
2 10Right-handed 310
Helix 26
26
C
11 27Right-handed alpha
Helix 27
27
C
33 38Right-handed alpha
Helix 28
28
C
56 67Right-handed alpha
Helix 29
29
C
94 128Right-handed alpha
Helix 30
30
C
144 155Right-handed alpha
Helix 31
31
C
171 179Right-handed alpha
Helix 32
32
C
180 192Right-handed alpha
Helix 33
33
C
204 214Right-handed alpha
Helix 34
34
C
225 240Right-handed alpha
Helix 35
35
C
255 260Right-handed alpha
Helix 36
36
C
270 275Right-handed alpha
Helix 37
37
D
3 10Right-handed 310
Helix 38
38
D
11 27Right-handed alpha
Helix 39
39
D
33 38Right-handed alpha
Helix 40
40
D
56 67Right-handed alpha
Helix 41
41
D
94 128Right-handed alpha
Helix 42
42
D
144 155Right-handed alpha
Helix 43
43
D
171 179Right-handed alpha
Helix 44
44
D
180 192Right-handed alpha
Helix 45
45
D
204 214Right-handed alpha
Helix 46
46
D
225 240Right-handed alpha
Helix 47
47
D
255 260Right-handed alpha
Helix 48
48
D
270 275Right-handed alpha
Helix 49
49
E
3 10Right-handed 310
Helix 50
50
E
11 27Right-handed alpha
Helix 51
51
E
33 38Right-handed alpha
Helix 52
52
E
56 67Right-handed alpha
Helix 53
53
E
94 128Right-handed alpha
Helix 54
54
E
144 155Right-handed alpha
Helix 55
55
E
171 179Right-handed alpha
Helix 56
56
E
180 192Right-handed alpha
Helix 57
57
E
204 214Right-handed alpha
Helix 58
58
E
225 240Right-handed alpha
Helix 59
59
E
255 260Right-handed alpha
Helix 60
60
E
270 275Right-handed alpha
Helix 61
61
F
2 10Right-handed 310
Helix 62
62
F
11 27Right-handed alpha
Helix 63
63
F
33 38Right-handed alpha
Helix 64
64
F
56 67Right-handed alpha
Helix 65
65
F
94 127Right-handed alpha
Helix 66
66
F
144 155Right-handed alpha
Helix 67
67
F
171 179Right-handed alpha
Helix 68
68
F
180 192Right-handed alpha
Helix 69
69
F
204 214Right-handed alpha
Helix 70
70
F
225 240Right-handed alpha
Helix 71
71
F
255 260Right-handed alpha
Helix 72
72
F
270 275Right-handed alpha
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There are 18 sheets in PDB entry 4KWW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
85 93anti-parallel
Strand 3
A
41 48anti-parallel
Strand 4
A
281 285anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
80 81anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 135first strand
Strand 2
A
266 268parallel
Strand 3
A
244 248parallel
Strand 4
A
218 222parallel
Strand 5
A
198 202parallel
Strand 6
A
168 170parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 73first strand
Strand 2
B
85 93anti-parallel
Strand 3
B
41 48anti-parallel
Strand 4
B
281 285anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 53first strand
Strand 2
B
80 81anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 135first strand
Strand 2
B
266 268parallel
Strand 3
B
244 248parallel
Strand 4
B
218 222parallel
Strand 5
B
198 202parallel
Strand 6
B
168 170parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
70 73first strand
Strand 2
C
85 93anti-parallel
Strand 3
C
41 48anti-parallel
Strand 4
C
281 285anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 53first strand
Strand 2
C
80 81anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
133 135first strand
Strand 2
C
266 268parallel
Strand 3
C
244 248parallel
Strand 4
C
218 222parallel
Strand 5
C
198 202parallel
Strand 6
C
168 170parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
70 73first strand
Strand 2
D
85 93anti-parallel
Strand 3
D
41 48anti-parallel
Strand 4
D
281 285anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 53first strand
Strand 2
D
80 81anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
133 135first strand
Strand 2
D
266 268parallel
Strand 3
D
244 248parallel
Strand 4
D
218 222parallel
Strand 5
D
198 202parallel
Strand 6
D
168 170parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
70 73first strand
Strand 2
E
85 93anti-parallel
Strand 3
E
41 48anti-parallel
Strand 4
E
281 285anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
52 53first strand
Strand 2
E
80 81anti-parallel
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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
133 135first strand
Strand 2
E
266 268parallel
Strand 3
E
244 248parallel
Strand 4
E
218 222parallel
Strand 5
E
198 202parallel
Strand 6
E
168 170parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
70 73first strand
Strand 2
F
85 93anti-parallel
Strand 3
F
41 48anti-parallel
Strand 4
F
281 285anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
52 53first strand
Strand 2
F
80 81anti-parallel
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There are 6 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
133 135first strand
Strand 2
F
266 268parallel
Strand 3
F
244 248parallel
Strand 4
F
218 222parallel
Strand 5
F
198 202parallel
Strand 6
F
168 170parallel
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