Analysis of interatomic Contacts of Structural Units in PDB entry:
4KXZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4KXZ entry

There are 12 chains in PDB entry 4KXZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1	SER 112
B	ALA 1	SER 112
D	ALA 1	SER 112
E	ALA 1	SER 112
H	VAL 2	HIS 224
J	VAL 2	HIS 221
N	VAL 2	HIS 224
Q	GLN 1	HIS 221
I	THR 2	GLY 213
L	GLU 1	GLY 213
M	GLU 1	GLY 213
P	GLU 1	GLY 213

There are 49 helices in PDB entry 4KXZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	4	8	Right-handed alpha
Helix 2	2	A	24	29	Right-handed alpha
Helix 3	3	A	56	69	Right-handed alpha
Helix 4	4	A	70	73	Right-handed 310
Helix 5	5	B	4	8	Right-handed alpha
Helix 6	6	B	24	29	Right-handed alpha
Helix 7	7	B	56	69	Right-handed alpha
Helix 8	8	B	70	73	Right-handed 310
Helix 9	9	D	3	8	Right-handed alpha
Helix 10	10	D	24	29	Right-handed alpha
Helix 11	11	D	56	69	Right-handed alpha
Helix 12	12	D	70	73	Right-handed 310
Helix 13	13	E	3	8	Right-handed alpha
Helix 14	14	E	24	29	Right-handed alpha
Helix 15	15	E	56	69	Right-handed alpha
Helix 16	16	E	70	73	Right-handed 310
Helix 17	17	H	62	65	Right-handed 310
Helix 18	18	H	87	91	Right-handed 310
Helix 19	19	H	163	165	Right-handed 310
Helix 20	20	H	194	196	Right-handed 310
Helix 21	21	H	208	211	Right-handed 310
Helix 22	22	J	26	29	Right-handed 310
Helix 23	23	J	87	91	Right-handed 310
Helix 24	24	J	163	165	Right-handed 310
Helix 25	25	J	194	196	Right-handed 310
Helix 26	26	J	208	211	Right-handed 310
Helix 27	27	N	62	65	Right-handed 310
Helix 28	28	N	87	91	Right-handed 310
Helix 29	29	N	163	165	Right-handed 310
Helix 30	30	N	194	196	Right-handed 310
Helix 31	31	N	208	211	Right-handed 310
Helix 32	32	Q	27	32	Right-handed alpha
Helix 33	33	Q	74	76	Right-handed 310
Helix 34	34	Q	87	91	Right-handed 310
Helix 35	35	Q	163	165	Right-handed 310
Helix 36	36	Q	193	197	Right-handed alpha
Helix 37	37	Q	208	211	Right-handed 310
Helix 38	38	I	80	84	Right-handed 310
Helix 39	39	I	122	128	Right-handed alpha
Helix 40	40	I	184	189	Right-handed alpha
Helix 41	41	L	80	84	Right-handed 310
Helix 42	42	L	122	128	Right-handed alpha
Helix 43	43	L	184	189	Right-handed alpha
Helix 44	44	M	80	84	Right-handed 310
Helix 45	45	M	122	128	Right-handed alpha
Helix 46	46	M	184	189	Right-handed alpha
Helix 47	47	P	80	84	Right-handed 310
Helix 48	48	P	122	127	Right-handed alpha
Helix 49	49	P	184	189	Right-handed alpha

There are 60 sheets in PDB entry 4KXZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC, BD, BE, BF, BG, BH,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	3	first strand
Strand 2	A	108	112	anti-parallel
Strand 3	A	77	80	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	18	first strand
Strand 2	A	43	45	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	23	first strand
Strand 2	A	38	39	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	35	first strand
Strand 2	A	83	92	anti-parallel
Strand 3	A	95	106	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	3	first strand
Strand 2	B	108	112	anti-parallel
Strand 3	B	77	80	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	18	first strand
Strand 2	B	43	45	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	23	first strand
Strand 2	B	38	40	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	35	first strand
Strand 2	B	83	92	anti-parallel
Strand 3	B	95	106	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	16	18	first strand
Strand 2	D	43	45	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	23	first strand
Strand 2	D	38	40	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	35	first strand
Strand 2	D	83	92	anti-parallel
Strand 3	D	95	106	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	80	first strand
Strand 2	D	109	112	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	16	18	first strand
Strand 2	E	43	45	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	21	23	first strand
Strand 2	E	38	40	anti-parallel

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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	35	first strand
Strand 2	E	83	92	anti-parallel
Strand 3	E	95	106	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	77	80	first strand
Strand 2	E	109	112	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	6	first strand
Strand 2	H	18	24	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	114	118	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	34	40	anti-parallel
Strand 5	H	44	52	anti-parallel
Strand 6	H	57	60	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	114	118	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	107	110	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	127	131	first strand
Strand 2	H	142	152	anti-parallel
Strand 3	H	183	192	anti-parallel
Strand 4	H	170	172	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	127	131	first strand
Strand 2	H	142	152	anti-parallel
Strand 3	H	183	192	anti-parallel
Strand 4	H	176	177	anti-parallel

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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	158	161	first strand
Strand 2	H	201	207	anti-parallel
Strand 3	H	212	218	anti-parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	4	6	first strand
Strand 2	J	18	24	anti-parallel
Strand 3	J	78	83	anti-parallel
Strand 4	J	68	73	anti-parallel

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There are 6 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	114	118	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	34	39	anti-parallel
Strand 5	J	45	52	anti-parallel
Strand 6	J	57	60	anti-parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	114	118	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	107	110	anti-parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	127	131	first strand
Strand 2	J	142	152	anti-parallel
Strand 3	J	183	192	anti-parallel
Strand 4	J	170	172	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	127	131	first strand
Strand 2	J	142	152	anti-parallel
Strand 3	J	183	192	anti-parallel
Strand 4	J	176	177	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	158	161	first strand
Strand 2	J	202	207	anti-parallel
Strand 3	J	212	217	anti-parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	4	6	first strand
Strand 2	N	18	24	anti-parallel
Strand 3	N	78	83	anti-parallel
Strand 4	N	68	73	anti-parallel

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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	10	12	first strand
Strand 2	N	114	118	parallel
Strand 3	N	92	99	anti-parallel
Strand 4	N	34	39	anti-parallel
Strand 5	N	45	52	anti-parallel
Strand 6	N	57	60	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	10	12	first strand
Strand 2	N	114	118	parallel
Strand 3	N	92	99	anti-parallel
Strand 4	N	107	110	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	127	131	first strand
Strand 2	N	142	152	anti-parallel
Strand 3	N	183	192	anti-parallel
Strand 4	N	170	172	anti-parallel

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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	127	131	first strand
Strand 2	N	142	152	anti-parallel
Strand 3	N	183	192	anti-parallel
Strand 4	N	176	177	anti-parallel

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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	158	161	first strand
Strand 2	N	201	207	anti-parallel
Strand 3	N	212	218	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	4	6	first strand
Strand 2	Q	18	24	anti-parallel
Strand 3	Q	78	83	anti-parallel
Strand 4	Q	68	73	anti-parallel

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There are 6 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	10	12	first strand
Strand 2	Q	114	118	parallel
Strand 3	Q	92	99	anti-parallel
Strand 4	Q	34	39	anti-parallel
Strand 5	Q	45	52	anti-parallel
Strand 6	Q	57	60	anti-parallel

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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	10	12	first strand
Strand 2	Q	114	118	parallel
Strand 3	Q	92	99	anti-parallel
Strand 4	Q	107	110	anti-parallel

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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	127	131	first strand
Strand 2	Q	142	152	anti-parallel
Strand 3	Q	183	192	anti-parallel
Strand 4	Q	170	172	anti-parallel

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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	127	131	first strand
Strand 2	Q	142	152	anti-parallel
Strand 3	Q	183	192	anti-parallel
Strand 4	Q	176	177	anti-parallel

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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	158	161	first strand
Strand 2	Q	202	207	anti-parallel
Strand 3	Q	212	217	anti-parallel

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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	4	7	first strand
Strand 2	I	19	25	anti-parallel
Strand 3	I	71	76	anti-parallel
Strand 4	I	63	68	anti-parallel

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There are 6 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	13	first strand
Strand 2	I	103	107	parallel
Strand 3	I	86	91	anti-parallel
Strand 4	I	34	39	anti-parallel
Strand 5	I	46	50	anti-parallel
Strand 6	I	54	55	anti-parallel

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There are 4 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	13	first strand
Strand 2	I	103	107	parallel
Strand 3	I	86	91	anti-parallel
Strand 4	I	98	99	anti-parallel

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There are 4 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	115	119	first strand
Strand 2	I	130	140	anti-parallel
Strand 3	I	174	183	anti-parallel
Strand 4	I	160	164	anti-parallel

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There are 4 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	156	first strand
Strand 2	I	146	151	anti-parallel
Strand 3	I	192	198	anti-parallel
Strand 4	I	206	211	anti-parallel

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There are 4 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	7	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	71	76	anti-parallel
Strand 4	L	63	68	anti-parallel

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There are 6 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	103	107	parallel
Strand 3	L	85	91	anti-parallel
Strand 4	L	34	39	anti-parallel
Strand 5	L	46	50	anti-parallel
Strand 6	L	54	55	anti-parallel

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There are 4 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	103	107	parallel
Strand 3	L	85	91	anti-parallel
Strand 4	L	98	99	anti-parallel

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There are 4 strands in AW sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	115	119	first strand
Strand 2	L	130	140	anti-parallel
Strand 3	L	174	183	anti-parallel
Strand 4	L	160	164	anti-parallel

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There are 4 strands in AX sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	154	156	first strand
Strand 2	L	146	151	anti-parallel
Strand 3	L	192	198	anti-parallel
Strand 4	L	206	211	anti-parallel

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There are 4 strands in AY sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	4	7	first strand
Strand 2	M	19	25	anti-parallel
Strand 3	M	71	76	anti-parallel
Strand 4	M	63	68	anti-parallel

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There are 6 strands in AZ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	13	first strand
Strand 2	M	103	107	parallel
Strand 3	M	85	91	anti-parallel
Strand 4	M	34	39	anti-parallel
Strand 5	M	46	50	anti-parallel
Strand 6	M	54	55	anti-parallel

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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	13	first strand
Strand 2	M	103	107	parallel
Strand 3	M	85	91	anti-parallel
Strand 4	M	98	99	anti-parallel

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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	115	119	first strand
Strand 2	M	130	140	anti-parallel
Strand 3	M	174	183	anti-parallel
Strand 4	M	160	164	anti-parallel

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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	154	156	first strand
Strand 2	M	146	151	anti-parallel
Strand 3	M	192	198	anti-parallel
Strand 4	M	206	211	anti-parallel

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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	4	7	first strand
Strand 2	P	19	25	anti-parallel
Strand 3	P	71	76	anti-parallel
Strand 4	P	63	68	anti-parallel

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There are 6 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	10	13	first strand
Strand 2	P	103	107	parallel
Strand 3	P	86	91	anti-parallel
Strand 4	P	34	39	anti-parallel
Strand 5	P	46	50	anti-parallel
Strand 6	P	54	55	anti-parallel

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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	10	13	first strand
Strand 2	P	103	107	parallel
Strand 3	P	86	91	anti-parallel
Strand 4	P	98	99	anti-parallel

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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	115	119	first strand
Strand 2	P	130	140	anti-parallel
Strand 3	P	174	183	anti-parallel
Strand 4	P	160	164	anti-parallel

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There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	154	156	first strand
Strand 2	P	146	151	anti-parallel
Strand 3	P	192	198	anti-parallel
Strand 4	P	206	211	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4KXZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
4KXZ