Analysis of interatomic Contacts of Structural Units in PDB entry:
4L08


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4L08 entry

There are 8 chains in PDB entry 4L08 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLN 3GLY 208
A
 GLN 3GLY 208
C
 GLN 3GLY 208
D
 GLN 3GLY 208
E
 GLN 3GLY 208
F
 GLN 3GLY 208
G
 GLN 3GLY 208
H
 GLN 3GLY 208
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 4L08. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
3 10Right-handed alpha
Helix 2
2
B
30 35Right-handed alpha
Helix 3
3
B
44 61Right-handed alpha
Helix 4
4
B
76 80Right-handed 310
Helix 5
5
B
81 86Right-handed alpha
Helix 6
6
B
87 92Right-handed 310
Helix 7
7
B
102 106Right-handed 310
Helix 8
8
B
126 134Right-handed alpha
Helix 9
9
B
148 160Right-handed alpha
Helix 10
10
B
175 190Right-handed alpha
Helix 11
11
B
195 208Right-handed alpha
Helix 12
12
A
4 10Right-handed alpha
Helix 13
13
A
30 35Right-handed alpha
Helix 14
14
A
44 61Right-handed alpha
Helix 15
15
A
76 80Right-handed 310
Helix 16
16
A
81 86Right-handed alpha
Helix 17
17
A
87 92Right-handed 310
Helix 18
18
A
102 106Right-handed 310
Helix 19
19
A
126 134Right-handed alpha
Helix 20
20
A
148 160Right-handed alpha
Helix 21
21
A
175 190Right-handed alpha
Helix 22
22
A
195 208Right-handed alpha
Helix 23
23
C
4 10Right-handed alpha
Helix 24
24
C
30 35Right-handed alpha
Helix 25
25
C
44 61Right-handed alpha
Helix 26
26
C
73 77Right-handed 310
Helix 27
27
C
81 86Right-handed alpha
Helix 28
28
C
87 92Right-handed 310
Helix 29
29
C
102 106Right-handed 310
Helix 30
30
C
126 134Right-handed alpha
Helix 31
31
C
148 160Right-handed alpha
Helix 32
32
C
175 190Right-handed alpha
Helix 33
33
C
195 207Right-handed alpha
Helix 34
34
D
4 10Right-handed alpha
Helix 35
35
D
30 35Right-handed alpha
Helix 36
36
D
44 61Right-handed alpha
Helix 37
37
D
73 80Right-handed 310
Helix 38
38
D
81 86Right-handed alpha
Helix 39
39
D
87 92Right-handed 310
Helix 40
40
D
96 100Right-handed 310
Helix 41
41
D
102 106Right-handed 310
Helix 42
42
D
126 134Right-handed alpha
Helix 43
43
D
148 160Right-handed alpha
Helix 44
44
D
175 190Right-handed alpha
Helix 45
45
D
195 208Right-handed alpha
Helix 46
46
E
4 10Right-handed alpha
Helix 47
47
E
30 35Right-handed alpha
Helix 48
48
E
44 61Right-handed alpha
Helix 49
49
E
76 79Right-handed 310
Helix 50
50
E
80 86Right-handed alpha
Helix 51
51
E
87 92Right-handed 310
Helix 52
52
E
96 100Right-handed 310
Helix 53
53
E
102 106Right-handed 310
Helix 54
54
E
126 134Right-handed alpha
Helix 55
55
E
148 160Right-handed alpha
Helix 56
56
E
175 190Right-handed alpha
Helix 57
57
E
195 208Right-handed alpha
Helix 58
58
F
4 10Right-handed alpha
Helix 59
59
F
30 35Right-handed alpha
Helix 60
60
F
44 61Right-handed alpha
Helix 61
61
F
76 80Right-handed 310
Helix 62
62
F
81 86Right-handed alpha
Helix 63
63
F
87 92Right-handed 310
Helix 64
64
F
102 106Right-handed 310
Helix 65
65
F
126 134Right-handed alpha
Helix 66
66
F
148 160Right-handed alpha
Helix 67
67
F
175 190Right-handed alpha
Helix 68
68
F
195 208Right-handed alpha
Helix 69
69
G
4 10Right-handed alpha
Helix 70
70
G
30 35Right-handed alpha
Helix 71
71
G
44 61Right-handed alpha
Helix 72
72
G
81 86Right-handed alpha
Helix 73
73
G
87 92Right-handed 310
Helix 74
74
G
126 134Right-handed alpha
Helix 75
75
G
148 160Right-handed alpha
Helix 76
76
G
175 190Right-handed alpha
Helix 77
77
G
195 208Right-handed alpha
Helix 78
78
H
4 10Right-handed alpha
Helix 79
79
H
30 35Right-handed alpha
Helix 80
80
H
44 61Right-handed alpha
Helix 81
81
H
73 77Right-handed 310
Helix 82
82
H
81 86Right-handed alpha
Helix 83
83
H
87 92Right-handed 310
Helix 84
84
H
102 106Right-handed 310
Helix 85
85
H
126 134Right-handed alpha
Helix 86
86
H
148 160Right-handed alpha
Helix 87
87
H
175 190Right-handed alpha
Helix 88
88
H
195 207Right-handed alpha
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There are 16 sheets in PDB entry 4L08. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 116first strand
Strand 2
B
65 70parallel
Strand 3
B
22 27parallel
Strand 4
B
138 144parallel
Strand 5
B
171 172parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 116first strand
Strand 2
B
65 70parallel
Strand 3
B
22 27parallel
Strand 4
B
138 144parallel
Strand 5
B
163 167parallel
Strand 6
B
192 194parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 116first strand
Strand 2
A
65 70parallel
Strand 3
A
22 27parallel
Strand 4
A
138 144parallel
Strand 5
A
171 172parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 116first strand
Strand 2
A
65 70parallel
Strand 3
A
22 27parallel
Strand 4
A
138 144parallel
Strand 5
A
163 167parallel
Strand 6
A
192 194parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 116first strand
Strand 2
C
65 70parallel
Strand 3
C
22 27parallel
Strand 4
C
138 144parallel
Strand 5
C
171 172parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 116first strand
Strand 2
C
65 70parallel
Strand 3
C
22 27parallel
Strand 4
C
138 144parallel
Strand 5
C
163 167parallel
Strand 6
C
192 194parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
112 116first strand
Strand 2
D
65 70parallel
Strand 3
D
22 27parallel
Strand 4
D
138 144parallel
Strand 5
D
171 172parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
112 116first strand
Strand 2
D
65 70parallel
Strand 3
D
22 27parallel
Strand 4
D
138 144parallel
Strand 5
D
163 167parallel
Strand 6
D
192 194parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
112 116first strand
Strand 2
E
65 70parallel
Strand 3
E
22 27parallel
Strand 4
E
138 144parallel
Strand 5
E
171 172parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
112 116first strand
Strand 2
E
65 70parallel
Strand 3
E
22 27parallel
Strand 4
E
138 144parallel
Strand 5
E
163 167parallel
Strand 6
E
192 194parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
112 116first strand
Strand 2
F
65 70parallel
Strand 3
F
22 27parallel
Strand 4
F
138 144parallel
Strand 5
F
171 172parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
112 116first strand
Strand 2
F
65 70parallel
Strand 3
F
22 27parallel
Strand 4
F
138 144parallel
Strand 5
F
163 167parallel
Strand 6
F
192 194parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
112 116first strand
Strand 2
G
65 70parallel
Strand 3
G
22 27parallel
Strand 4
G
138 144parallel
Strand 5
G
171 172parallel
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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
112 116first strand
Strand 2
G
65 70parallel
Strand 3
G
22 27parallel
Strand 4
G
138 144parallel
Strand 5
G
163 167parallel
Strand 6
G
192 194parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
112 116first strand
Strand 2
H
65 70parallel
Strand 3
H
22 27parallel
Strand 4
H
138 144parallel
Strand 5
H
171 172parallel
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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
112 116first strand
Strand 2
H
65 70parallel
Strand 3
H
22 27parallel
Strand 4
H
138 144parallel
Strand 5
H
163 167parallel
Strand 6
H
192 194parallel
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