Analysis of interatomic Contacts of Structural Units in PDB entry:
4L0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4L0C entry

There are 8 chains in PDB entry 4L0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ARG 255
B
 MSE 1ARG 255
C
 MSE 1SER 253
D
 MSE 1SER 253
E
 MSE 1ARG 255
F
 LYS 2ASN 254
G
 LYS 2SER 253
H
 LYS 2ARG 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are104 helices in PDB entry 4L0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 37Right-handed 310
Helix 2
2
A
38 46Right-handed alpha
Helix 3
3
A
70 84Right-handed alpha
Helix 4
4
A
94 107Right-handed alpha
Helix 5
5
A
132 146Right-handed alpha
Helix 6
6
A
148 154Right-handed alpha
Helix 7
7
A
160 171Right-handed alpha
Helix 8
8
A
172 174Right-handed 310
Helix 9
9
A
175 189Right-handed alpha
Helix 10
10
A
191 196Right-handed alpha
Helix 11
11
A
214 225Right-handed alpha
Helix 12
12
A
239 244Right-handed alpha
Helix 13
13
A
244 253Right-handed alpha
Helix 14
14
B
34 37Right-handed 310
Helix 15
15
B
38 46Right-handed alpha
Helix 16
16
B
70 83Right-handed alpha
Helix 17
17
B
94 107Right-handed alpha
Helix 18
18
B
132 146Right-handed alpha
Helix 19
19
B
148 154Right-handed alpha
Helix 20
20
B
160 171Right-handed alpha
Helix 21
21
B
172 174Right-handed 310
Helix 22
22
B
175 189Right-handed alpha
Helix 23
23
B
191 196Right-handed alpha
Helix 24
24
B
214 225Right-handed alpha
Helix 25
25
B
239 244Right-handed alpha
Helix 26
26
B
244 252Right-handed alpha
Helix 27
27
C
34 37Right-handed 310
Helix 28
28
C
38 46Right-handed alpha
Helix 29
29
C
70 83Right-handed alpha
Helix 30
30
C
94 107Right-handed alpha
Helix 31
31
C
132 146Right-handed alpha
Helix 32
32
C
148 154Right-handed alpha
Helix 33
33
C
160 171Right-handed alpha
Helix 34
34
C
172 174Right-handed 310
Helix 35
35
C
175 189Right-handed alpha
Helix 36
36
C
191 196Right-handed alpha
Helix 37
37
C
214 225Right-handed alpha
Helix 38
38
C
239 244Right-handed alpha
Helix 39
39
C
244 253Right-handed alpha
Helix 40
40
D
34 37Right-handed 310
Helix 41
41
D
38 46Right-handed alpha
Helix 42
42
D
70 83Right-handed alpha
Helix 43
43
D
94 107Right-handed alpha
Helix 44
44
D
132 146Right-handed alpha
Helix 45
45
D
148 154Right-handed alpha
Helix 46
46
D
160 171Right-handed alpha
Helix 47
47
D
172 174Right-handed 310
Helix 48
48
D
175 189Right-handed alpha
Helix 49
49
D
191 196Right-handed alpha
Helix 50
50
D
214 225Right-handed alpha
Helix 51
51
D
239 244Right-handed alpha
Helix 52
52
D
244 253Right-handed alpha
Helix 53
53
E
34 37Right-handed 310
Helix 54
54
E
38 46Right-handed alpha
Helix 55
55
E
70 83Right-handed alpha
Helix 56
56
E
94 107Right-handed alpha
Helix 57
57
E
132 146Right-handed alpha
Helix 58
58
E
148 154Right-handed alpha
Helix 59
59
E
160 171Right-handed alpha
Helix 60
60
E
172 174Right-handed 310
Helix 61
61
E
175 189Right-handed alpha
Helix 62
62
E
191 196Right-handed alpha
Helix 63
63
E
214 225Right-handed alpha
Helix 64
64
E
239 244Right-handed alpha
Helix 65
65
E
244 254Right-handed alpha
Helix 66
66
F
34 37Right-handed 310
Helix 67
67
F
38 46Right-handed alpha
Helix 68
68
F
70 83Right-handed alpha
Helix 69
69
F
94 107Right-handed alpha
Helix 70
70
F
132 146Right-handed alpha
Helix 71
71
F
148 154Right-handed alpha
Helix 72
72
F
160 171Right-handed alpha
Helix 73
73
F
172 174Right-handed 310
Helix 74
74
F
175 189Right-handed alpha
Helix 75
75
F
191 196Right-handed alpha
Helix 76
76
F
214 225Right-handed alpha
Helix 77
77
F
239 244Right-handed alpha
Helix 78
78
F
244 253Right-handed alpha
Helix 79
79
G
34 37Right-handed 310
Helix 80
80
G
38 46Right-handed alpha
Helix 81
81
G
70 83Right-handed alpha
Helix 82
82
G
94 107Right-handed alpha
Helix 83
83
G
132 146Right-handed alpha
Helix 84
84
G
148 154Right-handed alpha
Helix 85
85
G
160 171Right-handed alpha
Helix 86
86
G
172 174Right-handed 310
Helix 87
87
G
175 189Right-handed alpha
Helix 88
88
G
191 196Right-handed alpha
Helix 89
89
G
214 225Right-handed alpha
Helix 90
90
G
239 244Right-handed alpha
Helix 91
91
G
244 253Right-handed alpha
Helix 92
92
H
34 37Right-handed 310
Helix 93
93
H
38 46Right-handed alpha
Helix 94
94
H
70 83Right-handed alpha
Helix 95
95
H
94 107Right-handed alpha
Helix 96
96
H
132 146Right-handed alpha
Helix 97
97
H
148 154Right-handed alpha
Helix 98
98
H
160 171Right-handed alpha
Helix 99
99
H
172 174Right-handed 310
Helix 100
100
H
175 189Right-handed alpha
Helix 101
101
H
191 196Right-handed alpha
Helix 102
102
H
214 225Right-handed alpha
Helix 103
103
H
239 244Right-handed alpha
Helix 104
104
H
244 254Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 4L0C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 8first strand
Strand 2
A
11 18anti-parallel
Strand 3
A
50 54anti-parallel
Strand 4
A
24 28parallel
Strand 5
A
88 93parallel
Strand 6
A
111 117parallel
Strand 7
A
202 207parallel
Strand 8
A
229 233parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 8first strand
Strand 2
B
11 18anti-parallel
Strand 3
B
49 54anti-parallel
Strand 4
B
23 28parallel
Strand 5
B
88 93parallel
Strand 6
B
111 117parallel
Strand 7
B
202 207parallel
Strand 8
B
229 233parallel
Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 8first strand
Strand 2
C
11 18anti-parallel
Strand 3
C
50 54anti-parallel
Strand 4
C
24 28parallel
Strand 5
C
88 93parallel
Strand 6
C
111 117parallel
Strand 7
C
202 207parallel
Strand 8
C
229 233parallel
Back to list of sheets
Back to top of page

There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 8first strand
Strand 2
D
11 18anti-parallel
Strand 3
D
49 54anti-parallel
Strand 4
D
23 28parallel
Strand 5
D
88 93parallel
Strand 6
D
111 117parallel
Strand 7
D
202 207parallel
Strand 8
D
229 233parallel
Back to list of sheets
Back to top of page

There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 8first strand
Strand 2
E
11 18anti-parallel
Strand 3
E
50 54anti-parallel
Strand 4
E
24 28parallel
Strand 5
E
88 93parallel
Strand 6
E
111 117parallel
Strand 7
E
202 207parallel
Strand 8
E
229 233parallel
Back to list of sheets
Back to top of page

There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3 8first strand
Strand 2
F
11 18anti-parallel
Strand 3
F
50 54anti-parallel
Strand 4
F
24 28parallel
Strand 5
F
88 93parallel
Strand 6
F
111 117parallel
Strand 7
F
202 207parallel
Strand 8
F
229 233parallel
Back to list of sheets
Back to top of page

There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
3 8first strand
Strand 2
G
11 18anti-parallel
Strand 3
G
50 54anti-parallel
Strand 4
G
24 28parallel
Strand 5
G
88 93parallel
Strand 6
G
111 117parallel
Strand 7
G
202 207parallel
Strand 8
G
229 233parallel
Back to list of sheets
Back to top of page

There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 8first strand
Strand 2
H
11 18anti-parallel
Strand 3
H
50 54anti-parallel
Strand 4
H
24 28parallel
Strand 5
H
88 93parallel
Strand 6
H
111 117parallel
Strand 7
H
202 207parallel
Strand 8
H
229 233parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il