Analysis of interatomic Contacts of Structural Units in PDB entry:
4L0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4L0F entry

There is 1 chain in PDB entry 4L0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -14SER 423
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 4L0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-1 3Right-handed 310
Helix 2
2
A
11 15Right-handed 310
Helix 3
3
A
21 26Right-handed alpha
Helix 4
4
A
28 39Right-handed alpha
Helix 5
5
A
58 68Right-handed alpha
Helix 6
6
A
79 86Right-handed alpha
Helix 7
7
A
94 98Right-handed 310
Helix 8
8
A
99 111Right-handed alpha
Helix 9
9
A
112 114Right-handed 310
Helix 10
10
A
115 141Right-handed alpha
Helix 11
11
A
145 149Right-handed alpha
Helix 12
12
A
150 152Right-handed 310
Helix 13
13
A
153 163Right-handed alpha
Helix 14
14
A
165 167Right-handed 310
Helix 15
15
A
168 180Right-handed alpha
Helix 16
16
A
186 213Right-handed alpha
Helix 17
17
A
217 224Right-handed alpha
Helix 18
18
A
233 266Right-handed alpha
Helix 19
19
A
266 275Right-handed alpha
Helix 20
20
A
279 292Right-handed alpha
Helix 21
21
A
322 326Right-handed alpha
Helix 22
22
A
352 356Right-handed 310
Helix 23
23
A
359 377Right-handed alpha
Helix 24
24
A
408 417Right-handed alpha
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There are 6 sheets in PDB entry 4L0F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-12 -10first strand
Strand 2
A
5 7anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 44first strand
Strand 2
A
53 56anti-parallel
Strand 3
A
317 321parallel
Strand 4
A
296 301anti-parallel
Strand 5
A
72 73anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 144first strand
Strand 2
A
402 407anti-parallel
Strand 3
A
378 383anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
230 231anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 307first strand
Strand 2
A
310 312anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 389first strand
Strand 2
A
398 400anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il