Analysis of interatomic Contacts of Structural Units in PDB entry:
4L0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4L0M entry

There is 1 chain in PDB entry 4L0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ILE 237
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 4L0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 17Right-handed alpha
Helix 2
2
A
54 69Right-handed alpha
Helix 3
3
A
107 111Right-handed 310
Helix 4
4
A
127 140Right-handed alpha
Helix 5
5
A
163 172Right-handed alpha
Helix 6
6
A
181 192Right-handed alpha
Helix 7
7
A
210 237Right-handed alpha
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There are 2 sheets in PDB entry 4L0M. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 27first strand
Strand 2
A
34 41anti-parallel
Strand 3
A
44 50anti-parallel
Strand 4
A
2 6parallel
Strand 5
A
73 82parallel
Strand 6
A
177 179anti-parallel
Strand 7
A
147 154parallel
Strand 8
A
94 102parallel
Strand 9
A
124 125anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 27first strand
Strand 2
A
34 41anti-parallel
Strand 3
A
44 50anti-parallel
Strand 4
A
2 6parallel
Strand 5
A
73 82parallel
Strand 6
A
196 204parallel
Strand 7
A
94 102anti-parallel
Strand 8
A
124 125anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il