Analysis of interatomic Contacts of Structural Units in PDB entry:
4L36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4L36 entry

There are 2 chains in PDB entry 4L36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ARG 406
B
 SER 5LEU 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 4L36. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 13Right-handed 310
Helix 2
2
A
16 27Right-handed alpha
Helix 3
3
A
42 52Right-handed alpha
Helix 4
4
A
59 68Right-handed alpha
Helix 5
5
A
77 85Right-handed alpha
Helix 6
6
A
86 90Right-handed 310
Helix 7
7
A
93 101Right-handed alpha
Helix 8
8
A
102 106Right-handed 310
Helix 9
9
A
107 128Right-handed alpha
Helix 10
10
A
138 142Right-handed alpha
Helix 11
11
A
145 154Right-handed alpha
Helix 12
12
A
158 160Right-handed 310
Helix 13
13
A
161 174Right-handed alpha
Helix 14
14
A
185 205Right-handed alpha
Helix 15
15
A
215 223Right-handed alpha
Helix 16
16
A
224 227Right-handed 310
Helix 17
17
A
231 247Right-handed alpha
Helix 18
18
A
249 264Right-handed alpha
Helix 19
19
A
265 275Right-handed alpha
Helix 20
20
A
275 290Right-handed alpha
Helix 21
21
A
320 325Right-handed alpha
Helix 22
22
A
343 347Right-handed 310
Helix 23
23
A
352 356Right-handed 310
Helix 24
24
A
359 376Right-handed alpha
Helix 25
25
B
5 13Right-handed 310
Helix 26
26
B
16 27Right-handed alpha
Helix 27
27
B
42 51Right-handed alpha
Helix 28
28
B
59 68Right-handed alpha
Helix 29
29
B
77 85Right-handed alpha
Helix 30
30
B
86 90Right-handed 310
Helix 31
31
B
93 101Right-handed alpha
Helix 32
32
B
102 106Right-handed 310
Helix 33
33
B
107 128Right-handed alpha
Helix 34
34
B
138 142Right-handed alpha
Helix 35
35
B
144 154Right-handed alpha
Helix 36
36
B
158 160Right-handed 310
Helix 37
37
B
161 173Right-handed alpha
Helix 38
38
B
185 206Right-handed alpha
Helix 39
39
B
215 223Right-handed alpha
Helix 40
40
B
224 227Right-handed 310
Helix 41
41
B
231 248Right-handed alpha
Helix 42
42
B
249 264Right-handed alpha
Helix 43
43
B
265 275Right-handed alpha
Helix 44
44
B
275 281Right-handed alpha
Helix 45
45
B
281 290Right-handed alpha
Helix 46
46
B
320 325Right-handed alpha
Helix 47
47
B
343 347Right-handed 310
Helix 48
48
B
352 356Right-handed 310
Helix 49
49
B
359 378Right-handed alpha
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There are 8 sheets in PDB entry 4L36. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
37 40anti-parallel
Strand 3
A
316 319parallel
Strand 4
A
296 300anti-parallel
Strand 5
A
55 56anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 137first strand
Strand 2
A
402 404anti-parallel
Strand 3
A
382 383anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 306first strand
Strand 2
A
309 311anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 389first strand
Strand 2
A
398 400anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 32first strand
Strand 2
B
37 40anti-parallel
Strand 3
B
316 319parallel
Strand 4
B
296 300anti-parallel
Strand 5
B
55 56anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 137first strand
Strand 2
B
402 404anti-parallel
Strand 3
B
382 383anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
304 306first strand
Strand 2
B
309 311anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
388 389first strand
Strand 2
B
398 400anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il