Analysis of interatomic Contacts of Structural Units in PDB entry:
4L3V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4L3V entry

There are 3 chains in PDB entry 4L3V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PRO 41GLN 550
A
 PRO 41GLN 550
C
 PRO 41GLN 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 74 helices in PDB entry 4L3V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
59 63Right-handed 310
Helix 2
2
B
79 84Right-handed 310
Helix 3
3
B
94 99Right-handed alpha
Helix 4
4
B
111 113Right-handed 310
Helix 5
5
B
118 133Right-handed alpha
Helix 6
6
B
148 162Right-handed alpha
Helix 7
7
B
174 185Right-handed alpha
Helix 8
8
B
202 214Right-handed alpha
Helix 9
9
B
226 235Right-handed alpha
Helix 10
10
B
235 244Right-handed alpha
Helix 11
11
B
258 272Right-handed alpha
Helix 12
12
B
290 295Right-handed 310
Helix 13
13
B
327 341Right-handed alpha
Helix 14
14
B
347 361Right-handed alpha
Helix 15
15
B
362 364Right-handed 310
Helix 16
16
B
377 382Right-handed 310
Helix 17
17
B
387 394Right-handed alpha
Helix 18
18
B
398 406Right-handed alpha
Helix 19
19
B
407 411Right-handed 310
Helix 20
20
B
413 418Right-handed 310
Helix 21
21
B
430 442Right-handed alpha
Helix 22
22
B
461 470Right-handed alpha
Helix 23
23
B
478 483Right-handed 310
Helix 24
24
B
495 504Right-handed alpha
Helix 25
25
B
535 548Right-handed alpha
Helix 26
26
A
59 63Right-handed 310
Helix 27
27
A
79 84Right-handed 310
Helix 28
28
A
93 99Right-handed alpha
Helix 29
29
A
111 113Right-handed 310
Helix 30
30
A
118 133Right-handed alpha
Helix 31
31
A
148 162Right-handed alpha
Helix 32
32
A
174 185Right-handed alpha
Helix 33
33
A
202 214Right-handed alpha
Helix 34
34
A
226 235Right-handed alpha
Helix 35
35
A
235 244Right-handed alpha
Helix 36
36
A
258 272Right-handed alpha
Helix 37
37
A
290 295Right-handed 310
Helix 38
38
A
327 343Right-handed alpha
Helix 39
39
A
347 361Right-handed alpha
Helix 40
40
A
362 364Right-handed 310
Helix 41
41
A
377 382Right-handed 310
Helix 42
42
A
387 394Right-handed alpha
Helix 43
43
A
398 406Right-handed alpha
Helix 44
44
A
407 411Right-handed 310
Helix 45
45
A
413 418Right-handed 310
Helix 46
46
A
430 442Right-handed alpha
Helix 47
47
A
461 470Right-handed alpha
Helix 48
48
A
478 483Right-handed 310
Helix 49
49
A
495 503Right-handed alpha
Helix 50
50
A
535 548Right-handed alpha
Helix 51
51
C
79 84Right-handed 310
Helix 52
52
C
94 99Right-handed alpha
Helix 53
53
C
111 113Right-handed 310
Helix 54
54
C
118 133Right-handed alpha
Helix 55
55
C
148 162Right-handed alpha
Helix 56
56
C
174 185Right-handed alpha
Helix 57
57
C
202 214Right-handed alpha
Helix 58
58
C
226 235Right-handed alpha
Helix 59
59
C
235 244Right-handed alpha
Helix 60
60
C
258 272Right-handed alpha
Helix 61
61
C
290 295Right-handed 310
Helix 62
62
C
327 343Right-handed alpha
Helix 63
63
C
347 361Right-handed alpha
Helix 64
64
C
362 364Right-handed 310
Helix 65
65
C
377 382Right-handed 310
Helix 66
66
C
387 394Right-handed alpha
Helix 67
67
C
398 406Right-handed alpha
Helix 68
68
C
407 411Right-handed 310
Helix 69
69
C
413 418Right-handed 310
Helix 70
70
C
430 442Right-handed alpha
Helix 71
71
C
461 470Right-handed alpha
Helix 72
72
C
478 483Right-handed 310
Helix 73
73
C
495 504Right-handed alpha
Helix 74
74
C
535 548Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 4L3V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 91first strand
Strand 2
B
104 109anti-parallel
Strand 3
B
369 374parallel
Strand 4
B
250 254parallel
Strand 5
B
276 282parallel
Strand 6
B
322 326parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 191first strand
Strand 2
B
164 170parallel
Strand 3
B
141 145parallel
Strand 4
B
217 219parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
445 449first strand
Strand 2
B
455 460anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
488 490first strand
Strand 2
B
509 512parallel
Strand 3
B
530 534anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
C
89 91parallel
Strand 3
C
104 109anti-parallel
Strand 4
C
369 374parallel
Strand 5
C
250 254parallel
Strand 6
C
276 282parallel
Strand 7
C
322 326parallel
Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 326first strand
Strand 2
A
276 282parallel
Strand 3
A
250 254parallel
Strand 4
A
369 374parallel
Strand 5
A
104 109parallel
Strand 6
A
89 91anti-parallel
Strand 7
C
76 77parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 191first strand
Strand 2
A
164 170parallel
Strand 3
A
141 145parallel
Strand 4
A
217 219parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
445 449first strand
Strand 2
A
455 460anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
488 490first strand
Strand 2
A
509 512parallel
Strand 3
A
530 534anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
187 191first strand
Strand 2
C
164 170parallel
Strand 3
C
141 145parallel
Strand 4
C
217 219parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
445 449first strand
Strand 2
C
455 460anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
488 490first strand
Strand 2
C
509 512parallel
Strand 3
C
530 534anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il