Analysis of interatomic Contacts of Structural Units in PDB entry:
4L69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4L69 entry

There is 1 chain in PDB entry 4L69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2ASP 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 4L69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 30Right-handed alpha
Helix 2
2
A
88 101Right-handed alpha
Helix 3
3
A
119 141Right-handed alpha
Helix 4
4
A
154 168Right-handed alpha
Helix 5
5
A
205 216Right-handed alpha
Helix 6
6
A
231 244Right-handed alpha
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There are 2 sheets in PDB entry 4L69. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
A
39 43parallel
Strand 3
A
48 56anti-parallel
Strand 4
A
62 71anti-parallel
Strand 5
A
17 20anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 153first strand
Strand 2
A
105 109parallel
Strand 3
A
79 84parallel
Strand 4
A
193 198parallel
Strand 5
A
170 175parallel
Strand 6
A
218 220parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il