Analysis of interatomic Contacts of Structural Units in PDB entry:
4LAT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LAT entry

There is 1 chain in PDB entry 4LAT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 31GLY 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4LAT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 56Right-handed alpha
Helix 2
2
A
67 77Right-handed alpha
Helix 3
3
A
88 92Right-handed 310
Helix 4
4
A
96 98Right-handed 310
Helix 5
5
A
124 133Right-handed alpha
Helix 6
6
A
138 143Right-handed 310
Helix 7
7
A
158 169Right-handed alpha
Helix 8
8
A
182 193Right-handed alpha
Helix 9
9
A
203 205Right-handed 310
Helix 10
10
A
220 226Right-handed alpha
Helix 11
11
A
244 256Right-handed alpha
Helix 12
12
A
256 262Right-handed alpha
Helix 13
13
A
262 267Right-handed alpha
Helix 14
14
A
271 275Right-handed 310
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There are 4 sheets in PDB entry 4LAT. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 66first strand
Strand 2
A
32 37parallel
Strand 3
A
82 85parallel
Strand 4
A
232 240anti-parallel
Strand 5
A
100 114anti-parallel
Strand 6
A
196 201anti-parallel
Strand 7
A
150 154parallel
Strand 8
A
178 180parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 66first strand
Strand 2
A
32 37parallel
Strand 3
A
82 85parallel
Strand 4
A
232 240anti-parallel
Strand 5
A
100 114anti-parallel
Strand 6
A
210 211anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
213 214parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 279first strand
Strand 2
A
285 287anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il