Analysis of interatomic Contacts of Structural Units in PDB entry:
4LCB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LCB entry

There is 1 chain in PDB entry 4LCB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 93PHE 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4LCB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
95 99Right-handed 310
Helix 2
2
A
102 113Right-handed alpha
Helix 3
3
A
113 119Right-handed alpha
Helix 4
4
A
120 123Right-handed 310
Helix 5
5
A
140 152Right-handed alpha
Helix 6
6
A
161 165Right-handed alpha
Helix 7
7
A
171 191Right-handed alpha
Helix 8
8
A
200 205Right-handed 310
Helix 9
9
A
217 229Right-handed alpha
Helix 10
10
A
246 250Right-handed 310
Helix 11
11
A
251 256Right-handed alpha
Helix 12
12
A
268 281Right-handed alpha
Helix 13
13
A
289 297Right-handed alpha
Helix 14
14
A
301 323Right-handed alpha
Helix 15
15
A
332 343Right-handed alpha
Helix 16
16
A
348 362Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4LCB.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 160first strand
Strand 2
A
194 199parallel
Strand 3
A
238 244parallel
Strand 4
A
130 134parallel
Strand 5
A
260 263parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il