Analysis of interatomic Contacts of Structural Units in PDB entry:
4LCJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LCJ entry

There are 8 chains in PDB entry 4LCJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 33PHE 362
B
 ARG 33PHE 362
C
 ARG 33PHE 362
D
 ARG 33PHE 361
E
 PRO 34GLU 360
F
 ARG 33PHE 361
G
 LEU 35GLU 360
H
 ARG 33PHE 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are128 helices in PDB entry 4LCJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
46 52Right-handed alpha
Helix 2
2
A
64 68Right-handed 310
Helix 3
3
A
69 75Right-handed alpha
Helix 4
4
A
88 94Right-handed alpha
Helix 5
5
A
112 119Right-handed alpha
Helix 6
6
A
130 148Right-handed alpha
Helix 7
7
A
148 158Right-handed alpha
Helix 8
8
A
164 172Right-handed alpha
Helix 9
9
A
189 200Right-handed alpha
Helix 10
10
A
201 203Right-handed 310
Helix 11
11
A
216 221Right-handed alpha
Helix 12
12
A
228 236Right-handed alpha
Helix 13
13
A
254 259Right-handed alpha
Helix 14
14
A
272 276Right-handed 310
Helix 15
15
A
277 287Right-handed alpha
Helix 16
16
A
326 347Right-handed alpha
Helix 17
17
B
46 52Right-handed alpha
Helix 18
18
B
64 68Right-handed 310
Helix 19
19
B
69 75Right-handed alpha
Helix 20
20
B
88 94Right-handed alpha
Helix 21
21
B
112 119Right-handed alpha
Helix 22
22
B
130 148Right-handed alpha
Helix 23
23
B
148 158Right-handed alpha
Helix 24
24
B
164 172Right-handed alpha
Helix 25
25
B
189 200Right-handed alpha
Helix 26
26
B
201 203Right-handed 310
Helix 27
27
B
216 221Right-handed alpha
Helix 28
28
B
228 236Right-handed alpha
Helix 29
29
B
254 259Right-handed alpha
Helix 30
30
B
272 276Right-handed 310
Helix 31
31
B
277 287Right-handed alpha
Helix 32
32
B
326 347Right-handed alpha
Helix 33
33
C
46 52Right-handed alpha
Helix 34
34
C
64 68Right-handed 310
Helix 35
35
C
69 75Right-handed alpha
Helix 36
36
C
88 94Right-handed alpha
Helix 37
37
C
112 119Right-handed alpha
Helix 38
38
C
130 148Right-handed alpha
Helix 39
39
C
148 158Right-handed alpha
Helix 40
40
C
164 172Right-handed alpha
Helix 41
41
C
189 200Right-handed alpha
Helix 42
42
C
201 203Right-handed 310
Helix 43
43
C
216 221Right-handed alpha
Helix 44
44
C
228 236Right-handed alpha
Helix 45
45
C
254 259Right-handed alpha
Helix 46
46
C
272 276Right-handed 310
Helix 47
47
C
277 287Right-handed alpha
Helix 48
48
C
326 347Right-handed alpha
Helix 49
49
D
46 52Right-handed alpha
Helix 50
50
D
64 68Right-handed 310
Helix 51
51
D
69 75Right-handed alpha
Helix 52
52
D
88 94Right-handed alpha
Helix 53
53
D
112 119Right-handed alpha
Helix 54
54
D
130 148Right-handed alpha
Helix 55
55
D
148 158Right-handed alpha
Helix 56
56
D
164 172Right-handed alpha
Helix 57
57
D
189 200Right-handed alpha
Helix 58
58
D
201 203Right-handed 310
Helix 59
59
D
216 221Right-handed alpha
Helix 60
60
D
228 236Right-handed alpha
Helix 61
61
D
254 259Right-handed alpha
Helix 62
62
D
272 276Right-handed 310
Helix 63
63
D
277 287Right-handed alpha
Helix 64
64
D
326 347Right-handed alpha
Helix 65
65
E
46 53Right-handed alpha
Helix 66
66
E
64 68Right-handed 310
Helix 67
67
E
69 75Right-handed alpha
Helix 68
68
E
88 94Right-handed alpha
Helix 69
69
E
112 119Right-handed alpha
Helix 70
70
E
130 148Right-handed alpha
Helix 71
71
E
148 158Right-handed alpha
Helix 72
72
E
164 172Right-handed alpha
Helix 73
73
E
189 200Right-handed alpha
Helix 74
74
E
201 203Right-handed 310
Helix 75
75
E
216 221Right-handed alpha
Helix 76
76
E
228 236Right-handed alpha
Helix 77
77
E
254 259Right-handed alpha
Helix 78
78
E
272 276Right-handed 310
Helix 79
79
E
277 287Right-handed alpha
Helix 80
80
E
326 347Right-handed alpha
Helix 81
81
F
47 52Right-handed alpha
Helix 82
82
F
64 68Right-handed 310
Helix 83
83
F
69 75Right-handed alpha
Helix 84
84
F
88 95Right-handed alpha
Helix 85
85
F
112 119Right-handed alpha
Helix 86
86
F
130 148Right-handed alpha
Helix 87
87
F
148 158Right-handed alpha
Helix 88
88
F
164 172Right-handed alpha
Helix 89
89
F
189 200Right-handed alpha
Helix 90
90
F
201 203Right-handed 310
Helix 91
91
F
216 221Right-handed alpha
Helix 92
92
F
228 236Right-handed alpha
Helix 93
93
F
254 259Right-handed alpha
Helix 94
94
F
272 276Right-handed 310
Helix 95
95
F
277 287Right-handed alpha
Helix 96
96
F
326 347Right-handed alpha
Helix 97
97
G
47 52Right-handed alpha
Helix 98
98
G
64 68Right-handed 310
Helix 99
99
G
69 75Right-handed alpha
Helix 100
100
G
88 94Right-handed alpha
Helix 101
101
G
112 119Right-handed alpha
Helix 102
102
G
130 148Right-handed alpha
Helix 103
103
G
148 158Right-handed alpha
Helix 104
104
G
164 172Right-handed alpha
Helix 105
105
G
189 200Right-handed alpha
Helix 106
106
G
201 203Right-handed 310
Helix 107
107
G
216 221Right-handed alpha
Helix 108
108
G
228 236Right-handed alpha
Helix 109
109
G
254 260Right-handed alpha
Helix 110
110
G
272 276Right-handed 310
Helix 111
111
G
277 287Right-handed alpha
Helix 112
112
G
326 346Right-handed alpha
Helix 113
113
H
47 52Right-handed alpha
Helix 114
114
H
64 68Right-handed 310
Helix 115
115
H
69 75Right-handed alpha
Helix 116
116
H
88 95Right-handed alpha
Helix 117
117
H
112 119Right-handed alpha
Helix 118
118
H
130 148Right-handed alpha
Helix 119
119
H
148 158Right-handed alpha
Helix 120
120
H
164 172Right-handed alpha
Helix 121
121
H
189 200Right-handed alpha
Helix 122
122
H
201 203Right-handed 310
Helix 123
123
H
216 221Right-handed alpha
Helix 124
124
H
228 236Right-handed alpha
Helix 125
125
H
254 259Right-handed alpha
Helix 126
126
H
272 276Right-handed 310
Helix 127
127
H
277 287Right-handed alpha
Helix 128
128
H
326 347Right-handed alpha
Back to top of page

There are 16 sheets in PDB entry 4LCJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
35 38parallel
Strand 3
A
76 81parallel
Strand 4
A
100 103parallel
Strand 5
A
122 124parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
205 209parallel
Strand 3
A
182 186parallel
Strand 4
A
238 241parallel
Strand 5
A
265 269parallel
Strand 6
A
290 295parallel
Strand 7
A
316 318parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 59first strand
Strand 2
B
35 38parallel
Strand 3
B
76 81parallel
Strand 4
B
100 103parallel
Strand 5
B
122 124parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 225first strand
Strand 2
B
205 209parallel
Strand 3
B
182 186parallel
Strand 4
B
238 241parallel
Strand 5
B
265 269parallel
Strand 6
B
290 295parallel
Strand 7
B
316 318parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 59first strand
Strand 2
C
35 38parallel
Strand 3
C
76 81parallel
Strand 4
C
100 103parallel
Strand 5
C
122 124parallel
Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
224 225first strand
Strand 2
C
205 209parallel
Strand 3
C
182 186parallel
Strand 4
C
238 241parallel
Strand 5
C
265 269parallel
Strand 6
C
290 295parallel
Strand 7
C
316 318parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 59first strand
Strand 2
D
35 38parallel
Strand 3
D
76 81parallel
Strand 4
D
100 103parallel
Strand 5
D
122 125parallel
Back to list of sheets
Back to top of page

There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
224 225first strand
Strand 2
D
205 209parallel
Strand 3
D
182 186parallel
Strand 4
D
238 241parallel
Strand 5
D
265 269parallel
Strand 6
D
290 295parallel
Strand 7
D
316 318parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
56 59first strand
Strand 2
E
35 38parallel
Strand 3
E
76 81parallel
Strand 4
E
100 103parallel
Strand 5
E
122 124parallel
Back to list of sheets
Back to top of page

There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
224 225first strand
Strand 2
E
205 209parallel
Strand 3
E
182 186parallel
Strand 4
E
238 241parallel
Strand 5
E
265 269parallel
Strand 6
E
290 295parallel
Strand 7
E
316 318parallel
Back to list of sheets
Back to top of page

There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
56 59first strand
Strand 2
F
35 38parallel
Strand 3
F
76 81parallel
Strand 4
F
100 103parallel
Strand 5
F
122 124parallel
Back to list of sheets
Back to top of page

There are 7 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
224 225first strand
Strand 2
F
205 209parallel
Strand 3
F
182 186parallel
Strand 4
F
238 241parallel
Strand 5
F
265 269parallel
Strand 6
F
290 295parallel
Strand 7
F
316 318parallel
Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
57 59first strand
Strand 2
G
36 38parallel
Strand 3
G
78 81parallel
Strand 4
G
101 103parallel
Strand 5
G
123 124parallel
Back to list of sheets
Back to top of page

There are 7 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
224 225first strand
Strand 2
G
205 209parallel
Strand 3
G
182 186parallel
Strand 4
G
238 241parallel
Strand 5
G
265 269parallel
Strand 6
G
290 295parallel
Strand 7
G
316 318parallel
Back to list of sheets
Back to top of page

There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
56 59first strand
Strand 2
H
35 38parallel
Strand 3
H
76 81parallel
Strand 4
H
100 103parallel
Strand 5
H
122 124parallel
Back to list of sheets
Back to top of page

There are 7 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
224 225first strand
Strand 2
H
205 209parallel
Strand 3
H
182 186parallel
Strand 4
H
238 241parallel
Strand 5
H
265 269parallel
Strand 6
H
290 295parallel
Strand 7
H
316 318parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il