Analysis of interatomic Contacts of Structural Units in PDB entry:
4LF1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LF1 entry

There are 12 chains in PDB entry 4LF1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 191
A
 ASN 193LYS 457
B
 MET 1ILE 191
B
 ASN 193ARG 453
C
 MET 1ILE 191
C
 ASN 193ARG 453
D
 MET 1ILE 191
D
 ASN 193LYS 457
E
 MET 1ILE 191
E
 ASN 193LYS 455
F
 MET 1ILE 191
F
 ASN 193LEU 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are158 helices in PDB entry 4LF1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 8Right-handed alpha
Helix 2
2
A
13 21Right-handed alpha
Helix 3
3
A
38 50Right-handed alpha
Helix 4
4
A
62 68Right-handed alpha
Helix 5
5
A
89 91Right-handed 310
Helix 6
6
A
101 110Right-handed alpha
Helix 7
7
A
111 116Right-handed 310
Helix 8
8
A
130 135Right-handed alpha
Helix 9
9
A
143 152Right-handed alpha
Helix 10
10
A
173 186Right-handed alpha
Helix 11
11
A
204 224Right-handed alpha
Helix 12
12
A
237 253Right-handed alpha
Helix 13
13
A
254 257Right-handed 310
Helix 14
14
A
265 269Right-handed alpha
Helix 15
15
A
269 280Right-handed alpha
Helix 16
16
A
292 297Right-handed alpha
Helix 17
17
A
305 317Right-handed alpha
Helix 18
18
A
334 336Right-handed 310
Helix 19
19
A
337 346Right-handed alpha
Helix 20
20
A
373 375Right-handed 310
Helix 21
21
A
376 385Right-handed alpha
Helix 22
22
A
393 399Right-handed alpha
Helix 23
23
A
403 421Right-handed alpha
Helix 24
24
A
423 428Right-handed alpha
Helix 25
25
A
431 441Right-handed alpha
Helix 26
26
A
441 449Right-handed alpha
Helix 27
27
A
451 456Right-handed alpha
Helix 28
28
B
3 8Right-handed alpha
Helix 29
29
B
13 21Right-handed alpha
Helix 30
30
B
38 50Right-handed alpha
Helix 31
31
B
62 68Right-handed alpha
Helix 32
32
B
77 79Right-handed 310
Helix 33
33
B
89 91Right-handed 310
Helix 34
34
B
101 110Right-handed alpha
Helix 35
35
B
111 116Right-handed 310
Helix 36
36
B
130 135Right-handed alpha
Helix 37
37
B
143 152Right-handed alpha
Helix 38
38
B
173 186Right-handed alpha
Helix 39
39
B
204 224Right-handed alpha
Helix 40
40
B
237 253Right-handed alpha
Helix 41
41
B
254 257Right-handed 310
Helix 42
42
B
265 269Right-handed alpha
Helix 43
43
B
269 280Right-handed alpha
Helix 44
44
B
292 297Right-handed alpha
Helix 45
45
B
305 317Right-handed alpha
Helix 46
46
B
334 336Right-handed 310
Helix 47
47
B
337 346Right-handed alpha
Helix 48
48
B
373 375Right-handed 310
Helix 49
49
B
376 385Right-handed alpha
Helix 50
50
B
394 399Right-handed alpha
Helix 51
51
B
403 421Right-handed alpha
Helix 52
52
B
423 428Right-handed alpha
Helix 53
53
B
431 441Right-handed alpha
Helix 54
54
B
441 449Right-handed alpha
Helix 55
55
C
3 8Right-handed alpha
Helix 56
56
C
13 21Right-handed alpha
Helix 57
57
C
38 50Right-handed alpha
Helix 58
58
C
62 67Right-handed alpha
Helix 59
59
C
89 91Right-handed 310
Helix 60
60
C
101 110Right-handed alpha
Helix 61
61
C
111 116Right-handed 310
Helix 62
62
C
130 135Right-handed alpha
Helix 63
63
C
143 152Right-handed alpha
Helix 64
64
C
173 186Right-handed alpha
Helix 65
65
C
204 224Right-handed alpha
Helix 66
66
C
237 253Right-handed alpha
Helix 67
67
C
254 257Right-handed 310
Helix 68
68
C
265 269Right-handed alpha
Helix 69
69
C
269 280Right-handed alpha
Helix 70
70
C
292 297Right-handed alpha
Helix 71
71
C
305 317Right-handed alpha
Helix 72
72
C
334 336Right-handed 310
Helix 73
73
C
337 346Right-handed alpha
Helix 74
74
C
373 375Right-handed 310
Helix 75
75
C
376 385Right-handed alpha
Helix 76
76
C
393 399Right-handed alpha
Helix 77
77
C
403 421Right-handed alpha
Helix 78
78
C
423 428Right-handed alpha
Helix 79
79
C
431 441Right-handed alpha
Helix 80
80
C
441 449Right-handed alpha
Helix 81
81
D
3 8Right-handed alpha
Helix 82
82
D
13 21Right-handed alpha
Helix 83
83
D
38 50Right-handed alpha
Helix 84
84
D
62 68Right-handed alpha
Helix 85
85
D
89 91Right-handed 310
Helix 86
86
D
101 110Right-handed alpha
Helix 87
87
D
111 116Right-handed 310
Helix 88
88
D
130 135Right-handed alpha
Helix 89
89
D
143 152Right-handed alpha
Helix 90
90
D
173 186Right-handed alpha
Helix 91
91
D
204 224Right-handed alpha
Helix 92
92
D
237 253Right-handed alpha
Helix 93
93
D
254 257Right-handed 310
Helix 94
94
D
265 269Right-handed alpha
Helix 95
95
D
269 280Right-handed alpha
Helix 96
96
D
292 297Right-handed alpha
Helix 97
97
D
305 317Right-handed alpha
Helix 98
98
D
334 336Right-handed 310
Helix 99
99
D
337 346Right-handed alpha
Helix 100
100
D
373 375Right-handed 310
Helix 101
101
D
376 385Right-handed alpha
Helix 102
102
D
393 399Right-handed alpha
Helix 103
103
D
403 421Right-handed alpha
Helix 104
104
D
423 430Right-handed alpha
Helix 105
105
D
431 441Right-handed alpha
Helix 106
106
D
441 449Right-handed alpha
Helix 107
107
E
3 8Right-handed alpha
Helix 108
108
E
13 21Right-handed alpha
Helix 109
109
E
38 50Right-handed alpha
Helix 110
110
E
62 68Right-handed alpha
Helix 111
111
E
89 91Right-handed 310
Helix 112
112
E
101 110Right-handed alpha
Helix 113
113
E
111 116Right-handed 310
Helix 114
114
E
130 135Right-handed alpha
Helix 115
115
E
143 152Right-handed alpha
Helix 116
116
E
173 186Right-handed alpha
Helix 117
117
E
204 224Right-handed alpha
Helix 118
118
E
237 253Right-handed alpha
Helix 119
119
E
254 257Right-handed 310
Helix 120
120
E
265 269Right-handed alpha
Helix 121
121
E
269 280Right-handed alpha
Helix 122
122
E
292 297Right-handed alpha
Helix 123
123
E
305 317Right-handed alpha
Helix 124
124
E
334 336Right-handed 310
Helix 125
125
E
337 346Right-handed alpha
Helix 126
126
E
373 375Right-handed 310
Helix 127
127
E
376 385Right-handed alpha
Helix 128
128
E
393 399Right-handed alpha
Helix 129
129
E
403 421Right-handed alpha
Helix 130
130
E
423 428Right-handed alpha
Helix 131
131
E
431 441Right-handed alpha
Helix 132
132
E
441 449Right-handed alpha
Helix 133
133
F
3 8Right-handed alpha
Helix 134
134
F
13 21Right-handed alpha
Helix 135
135
F
38 50Right-handed alpha
Helix 136
136
F
62 68Right-handed alpha
Helix 137
137
F
89 91Right-handed 310
Helix 138
138
F
101 110Right-handed alpha
Helix 139
139
F
111 116Right-handed 310
Helix 140
140
F
130 135Right-handed alpha
Helix 141
141
F
143 152Right-handed alpha
Helix 142
142
F
173 186Right-handed alpha
Helix 143
143
F
204 224Right-handed alpha
Helix 144
144
F
237 253Right-handed alpha
Helix 145
145
F
254 257Right-handed 310
Helix 146
146
F
265 269Right-handed alpha
Helix 147
147
F
269 280Right-handed alpha
Helix 148
148
F
292 297Right-handed alpha
Helix 149
149
F
305 317Right-handed alpha
Helix 150
150
F
334 336Right-handed 310
Helix 151
151
F
337 346Right-handed alpha
Helix 152
152
F
373 375Right-handed 310
Helix 153
153
F
376 385Right-handed alpha
Helix 154
154
F
393 399Right-handed alpha
Helix 155
155
F
403 421Right-handed alpha
Helix 156
156
F
423 429Right-handed alpha
Helix 157
157
F
431 441Right-handed alpha
Helix 158
158
F
441 449Right-handed alpha
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There are 18 sheets in PDB entry 4LF1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 76first strand
Strand 2
A
81 87anti-parallel
Strand 3
A
23 32anti-parallel
Strand 4
A
119 128anti-parallel
Strand 5
A
303 304parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 165first strand
Strand 2
A
190 192parallel
Strand 3
A
228 232parallel
Strand 4
A
259 264parallel
Strand 5
A
284 288parallel
Strand 6
A
320 322parallel
Strand 7
A
365 369parallel
Strand 8
A
390 392parallel
Strand 9
A
161 165parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 350first strand
Strand 2
A
355 357anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 76first strand
Strand 2
B
81 87anti-parallel
Strand 3
B
23 32anti-parallel
Strand 4
B
119 128anti-parallel
Strand 5
B
303 304parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 165first strand
Strand 2
B
190 192parallel
Strand 3
B
228 232parallel
Strand 4
B
259 264parallel
Strand 5
B
285 288parallel
Strand 6
B
320 322parallel
Strand 7
B
365 369parallel
Strand 8
B
390 392parallel
Strand 9
B
161 165parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 350first strand
Strand 2
B
355 357anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
71 76first strand
Strand 2
C
81 87anti-parallel
Strand 3
C
23 32anti-parallel
Strand 4
C
119 128anti-parallel
Strand 5
C
303 304parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
161 165first strand
Strand 2
C
190 192parallel
Strand 3
C
228 232parallel
Strand 4
C
259 264parallel
Strand 5
C
285 288parallel
Strand 6
C
320 322parallel
Strand 7
C
365 369parallel
Strand 8
C
390 392parallel
Strand 9
C
161 165parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
348 350first strand
Strand 2
C
355 357anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
71 76first strand
Strand 2
D
81 87anti-parallel
Strand 3
D
23 32anti-parallel
Strand 4
D
119 128anti-parallel
Strand 5
D
303 304parallel
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There are 9 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
161 165first strand
Strand 2
D
190 192parallel
Strand 3
D
228 232parallel
Strand 4
D
259 264parallel
Strand 5
D
284 288parallel
Strand 6
D
320 322parallel
Strand 7
D
365 369parallel
Strand 8
D
390 392parallel
Strand 9
D
161 165parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
348 350first strand
Strand 2
D
355 357anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
71 76first strand
Strand 2
E
81 87anti-parallel
Strand 3
E
23 32anti-parallel
Strand 4
E
119 128anti-parallel
Strand 5
E
303 304parallel
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There are 9 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
161 165first strand
Strand 2
E
190 192parallel
Strand 3
E
228 232parallel
Strand 4
E
259 264parallel
Strand 5
E
284 288parallel
Strand 6
E
320 322parallel
Strand 7
E
365 369parallel
Strand 8
E
390 392parallel
Strand 9
E
161 165parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
348 350first strand
Strand 2
E
355 357anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
71 76first strand
Strand 2
F
81 87anti-parallel
Strand 3
F
23 32anti-parallel
Strand 4
F
119 128anti-parallel
Strand 5
F
303 304parallel
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There are 9 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
161 165first strand
Strand 2
F
190 192parallel
Strand 3
F
228 232parallel
Strand 4
F
259 264parallel
Strand 5
F
284 288parallel
Strand 6
F
320 322parallel
Strand 7
F
365 369parallel
Strand 8
F
390 392parallel
Strand 9
F
161 165parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
348 350first strand
Strand 2
F
355 357anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il