Analysis of interatomic Contacts of Structural Units in PDB entry:
4LGC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LGC entry

There is 1 chain in PDB entry 4LGC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 16ASP 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4LGC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 43Right-handed alpha
Helix 2
2
A
63 80Right-handed alpha
Helix 3
3
A
95 108Right-handed alpha
Helix 4
4
A
120 132Right-handed alpha
Helix 5
5
A
152 159Right-handed alpha
Helix 6
6
A
198 210Right-handed alpha
Helix 7
7
A
225 238Right-handed alpha
Helix 8
8
A
249 260Right-handed alpha
Helix 9
9
A
268 278Right-handed alpha
Helix 10
10
A
282 287Right-handed 310
Helix 11
11
A
300 312Right-handed alpha
Helix 12
12
A
323 326Right-handed 310
Helix 13
13
A
333 339Right-handed alpha
Helix 14
14
A
375 380Right-handed alpha
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There are 4 sheets in PDB entry 4LGC. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
47 52anti-parallel
Strand 3
A
242 245parallel
Strand 4
A
217 219parallel
Strand 5
A
264 267parallel
Strand 6
A
291 294parallel
Strand 7
A
316 321parallel
Strand 8
A
328 332anti-parallel
Strand 9
A
345 346anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 114first strand
Strand 2
A
87 90parallel
Strand 3
A
135 137parallel
Strand 4
A
148 149parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 179first strand
Strand 2
A
187 191anti-parallel
Strand 3
A
381 383anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 355first strand
Strand 2
A
368 372anti-parallel
Strand 3
A
402 405anti-parallel
Strand 4
A
411 413anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il