Analysis of interatomic Contacts of Structural Units in PDB entry:
4LGL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4LGL entry

There are 4 chains in PDB entry 4LGL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 20	LYS 641
A	ASP 643	SER 973
A	GLU 975	GLU 978
B	VAL 18	LYS 376

There are 91 helices in PDB entry 4LGL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	20	25	Right-handed alpha
Helix 2	2	A	32	38	Right-handed alpha
Helix 3	3	A	41	53	Right-handed alpha
Helix 4	4	A	56	65	Right-handed alpha
Helix 5	5	A	82	95	Right-handed alpha
Helix 6	6	A	114	121	Right-handed alpha
Helix 7	7	A	124	129	Right-handed alpha
Helix 8	8	A	135	138	Right-handed 310
Helix 9	9	A	139	158	Right-handed alpha
Helix 10	10	A	168	184	Right-handed alpha
Helix 11	11	A	198	210	Right-handed alpha
Helix 12	12	A	247	257	Right-handed alpha
Helix 13	13	A	268	272	Right-handed 310
Helix 14	14	A	275	280	Right-handed alpha
Helix 15	15	A	295	299	Right-handed 310
Helix 16	16	A	309	315	Right-handed 310
Helix 17	17	A	344	349	Right-handed alpha
Helix 18	18	A	356	396	Right-handed alpha
Helix 19	19	A	417	428	Right-handed alpha
Helix 20	20	A	449	462	Right-handed alpha
Helix 21	21	A	469	477	Right-handed 310
Helix 22	22	A	482	486	Right-handed 310
Helix 23	23	A	494	498	Right-handed 310
Helix 24	24	A	502	516	Right-handed alpha
Helix 25	25	A	536	541	Right-handed alpha
Helix 26	26	A	542	544	Right-handed 310
Helix 27	27	A	545	550	Right-handed alpha
Helix 28	28	A	556	559	Right-handed 310
Helix 29	29	A	560	579	Right-handed alpha
Helix 30	30	A	589	607	Right-handed alpha
Helix 31	31	A	624	633	Right-handed alpha
Helix 32	32	A	649	660	Right-handed alpha
Helix 33	33	A	681	692	Right-handed alpha
Helix 34	34	A	700	706	Right-handed 310
Helix 35	35	A	711	716	Right-handed alpha
Helix 36	36	A	746	752	Right-handed 310
Helix 37	37	A	780	782	Right-handed 310
Helix 38	38	A	783	818	Right-handed alpha
Helix 39	39	A	840	848	Right-handed alpha
Helix 40	40	A	850	861	Right-handed alpha
Helix 41	41	A	885	908	Right-handed alpha
Helix 42	42	A	916	921	Right-handed alpha
Helix 43	43	A	924	930	Right-handed alpha
Helix 44	44	A	938	944	Right-handed alpha
Helix 45	45	A	946	951	Right-handed 310
Helix 46	46	B	19	25	Right-handed alpha
Helix 47	47	B	32	38	Right-handed alpha
Helix 48	48	B	41	53	Right-handed alpha
Helix 49	49	B	56	65	Right-handed alpha
Helix 50	50	B	82	95	Right-handed alpha
Helix 51	51	B	114	121	Right-handed alpha
Helix 52	52	B	124	129	Right-handed alpha
Helix 53	53	B	135	138	Right-handed 310
Helix 54	54	B	139	158	Right-handed alpha
Helix 55	55	B	168	184	Right-handed alpha
Helix 56	56	B	198	210	Right-handed alpha
Helix 57	57	B	211	213	Right-handed 310
Helix 58	58	B	247	257	Right-handed alpha
Helix 59	59	B	268	272	Right-handed 310
Helix 60	60	B	275	280	Right-handed alpha
Helix 61	61	B	295	299	Right-handed 310
Helix 62	62	B	309	315	Right-handed 310
Helix 63	63	B	356	396	Right-handed alpha
Helix 64	64	B	418	427	Right-handed alpha
Helix 65	65	B	449	462	Right-handed alpha
Helix 66	66	B	469	477	Right-handed 310
Helix 67	67	B	482	486	Right-handed 310
Helix 68	68	B	494	498	Right-handed 310
Helix 69	69	B	502	517	Right-handed alpha
Helix 70	70	B	536	541	Right-handed alpha
Helix 71	71	B	542	544	Right-handed 310
Helix 72	72	B	545	550	Right-handed alpha
Helix 73	73	B	556	559	Right-handed 310
Helix 74	74	B	560	579	Right-handed alpha
Helix 75	75	B	589	608	Right-handed alpha
Helix 76	76	B	624	633	Right-handed alpha
Helix 77	77	B	649	660	Right-handed alpha
Helix 78	78	B	681	692	Right-handed alpha
Helix 79	79	B	700	706	Right-handed 310
Helix 80	80	B	711	716	Right-handed alpha
Helix 81	81	B	746	752	Right-handed 310
Helix 82	82	B	780	782	Right-handed 310
Helix 83	83	B	783	818	Right-handed alpha
Helix 84	84	B	827	831	Right-handed 310
Helix 85	85	B	840	848	Right-handed alpha
Helix 86	86	B	850	861	Right-handed alpha
Helix 87	87	B	885	908	Right-handed alpha
Helix 88	88	B	916	921	Right-handed alpha
Helix 89	89	B	924	930	Right-handed alpha
Helix 90	90	B	938	944	Right-handed alpha
Helix 91	91	B	946	951	Right-handed 310

There are 12 sheets in PDB entry 4LGL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	101	102	first strand
Strand 2	A	430	431	parallel

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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	162	first strand
Strand 2	A	303	307	anti-parallel
Strand 3	A	283	287	anti-parallel
Strand 4	A	260	265	parallel
Strand 5	A	230	237	parallel
Strand 6	A	190	194	parallel
Strand 7	A	215	219	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	324	first strand
Strand 2	A	330	335	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	399	400	first strand
Strand 2	A	408	412	anti-parallel
Strand 3	A	439	443	anti-parallel
Strand 4	A	433	434	anti-parallel

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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	582	584	first strand
Strand 2	A	742	744	anti-parallel
Strand 3	A	719	721	anti-parallel
Strand 4	A	695	699	parallel
Strand 5	A	664	670	parallel
Strand 6	A	615	619	parallel
Strand 7	A	636	640	parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	823	824	first strand
Strand 2	A	836	839	anti-parallel
Strand 3	A	875	878	anti-parallel
Strand 4	A	867	868	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	102	first strand
Strand 2	B	430	431	parallel

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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	162	first strand
Strand 2	B	303	307	anti-parallel
Strand 3	B	283	287	anti-parallel
Strand 4	B	260	265	parallel
Strand 5	B	232	237	parallel
Strand 6	B	190	194	parallel
Strand 7	B	215	219	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	319	324	first strand
Strand 2	B	330	335	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	399	400	first strand
Strand 2	B	408	412	anti-parallel
Strand 3	B	439	443	anti-parallel
Strand 4	B	433	434	anti-parallel

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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	582	584	first strand
Strand 2	B	742	744	anti-parallel
Strand 3	B	719	721	anti-parallel
Strand 4	B	695	699	parallel
Strand 5	B	664	670	parallel
Strand 6	B	615	619	parallel
Strand 7	B	636	640	parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	823	824	first strand
Strand 2	B	836	839	anti-parallel
Strand 3	B	875	878	anti-parallel
Strand 4	B	867	868	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4LGL

Analysis of interatomic Contacts of Structural Units in PDB entry:
4LGL