Analysis of interatomic Contacts of Structural Units in PDB entry:
4LGV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4LGV entry

There are 3 chains in PDB entry 4LGV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 7	GLN 463
B	SER 6	GLN 463
C	HIS 7	LEU 365

There are 84 helices in PDB entry 4LGV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	19	25	Right-handed alpha
Helix 2	2	A	25	36	Right-handed alpha
Helix 3	3	A	52	67	Right-handed alpha
Helix 4	4	A	72	82	Right-handed alpha
Helix 5	5	A	92	103	Right-handed alpha
Helix 6	6	A	116	118	Right-handed 310
Helix 7	7	A	119	130	Right-handed alpha
Helix 8	8	A	147	160	Right-handed alpha
Helix 9	9	A	163	165	Right-handed 310
Helix 10	10	A	171	177	Right-handed 310
Helix 11	11	A	178	189	Right-handed alpha
Helix 12	12	A	189	194	Right-handed alpha
Helix 13	13	A	217	223	Right-handed alpha
Helix 14	14	A	224	231	Right-handed alpha
Helix 15	15	A	233	244	Right-handed alpha
Helix 16	16	A	251	264	Right-handed alpha
Helix 17	17	A	270	272	Right-handed 310
Helix 18	18	A	281	285	Right-handed 310
Helix 19	19	A	391	404	Right-handed alpha
Helix 20	20	A	412	429	Right-handed alpha
Helix 21	21	A	444	450	Right-handed alpha
Helix 22	22	B	19	25	Right-handed alpha
Helix 23	23	B	25	36	Right-handed alpha
Helix 24	24	B	52	67	Right-handed alpha
Helix 25	25	B	72	82	Right-handed alpha
Helix 26	26	B	92	103	Right-handed alpha
Helix 27	27	B	116	118	Right-handed 310
Helix 28	28	B	119	130	Right-handed alpha
Helix 29	29	B	147	160	Right-handed alpha
Helix 30	30	B	163	165	Right-handed 310
Helix 31	31	B	171	177	Right-handed 310
Helix 32	32	B	178	188	Right-handed alpha
Helix 33	33	B	189	194	Right-handed alpha
Helix 34	34	B	217	223	Right-handed alpha
Helix 35	35	B	224	231	Right-handed alpha
Helix 36	36	B	233	244	Right-handed alpha
Helix 37	37	B	251	265	Right-handed alpha
Helix 38	38	B	270	272	Right-handed 310
Helix 39	39	B	281	285	Right-handed 310
Helix 40	40	B	394	404	Right-handed alpha
Helix 41	41	B	412	429	Right-handed alpha
Helix 42	42	B	444	450	Right-handed alpha
Helix 43	43	C	19	25	Right-handed alpha
Helix 44	44	C	25	36	Right-handed alpha
Helix 45	45	C	52	67	Right-handed alpha
Helix 46	46	C	72	82	Right-handed alpha
Helix 47	47	C	92	103	Right-handed alpha
Helix 48	48	C	116	118	Right-handed 310
Helix 49	49	C	119	130	Right-handed alpha
Helix 50	50	C	147	160	Right-handed alpha
Helix 51	51	C	163	165	Right-handed 310
Helix 52	52	C	171	177	Right-handed 310
Helix 53	53	C	178	189	Right-handed alpha
Helix 54	54	C	189	194	Right-handed alpha
Helix 55	55	C	217	223	Right-handed alpha
Helix 56	56	C	224	231	Right-handed alpha
Helix 57	57	C	233	244	Right-handed alpha
Helix 58	58	C	251	265	Right-handed alpha
Helix 59	59	C	270	272	Right-handed 310
Helix 60	60	C	281	285	Right-handed 310
Helix 61	61	C	391	404	Right-handed alpha
Helix 62	62	C	412	429	Right-handed alpha
Helix 63	63	C	444	450	Right-handed alpha
Helix 64	64	D	19	25	Right-handed alpha
Helix 65	65	D	25	36	Right-handed alpha
Helix 66	66	D	52	67	Right-handed alpha
Helix 67	67	D	72	82	Right-handed alpha
Helix 68	68	D	92	103	Right-handed alpha
Helix 69	69	D	116	118	Right-handed 310
Helix 70	70	D	119	130	Right-handed alpha
Helix 71	71	D	147	160	Right-handed alpha
Helix 72	72	D	163	165	Right-handed 310
Helix 73	73	D	171	177	Right-handed 310
Helix 74	74	D	178	188	Right-handed alpha
Helix 75	75	D	189	194	Right-handed alpha
Helix 76	76	D	217	223	Right-handed alpha
Helix 77	77	D	224	231	Right-handed alpha
Helix 78	78	D	233	244	Right-handed alpha
Helix 79	79	D	251	264	Right-handed alpha
Helix 80	80	D	270	272	Right-handed 310
Helix 81	81	D	281	285	Right-handed 310
Helix 82	82	D	394	404	Right-handed alpha
Helix 83	83	D	412	429	Right-handed alpha
Helix 84	84	D	444	450	Right-handed alpha

There are 8 sheets in PDB entry 4LGV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	87	first strand
Strand 2	A	43	47	parallel
Strand 3	A	11	15	parallel
Strand 4	A	109	113	parallel
Strand 5	A	137	141	parallel
Strand 6	A	167	170	parallel

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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	383	first strand
Strand 2	A	362	371	anti-parallel
Strand 3	A	352	358	anti-parallel
Strand 4	A	326	333	anti-parallel
Strand 5	A	201	209	anti-parallel
Strand 6	A	314	319	parallel
Strand 7	A	297	302	anti-parallel
Strand 8	A	274	279	anti-parallel
Strand 9	A	433	436	parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	87	first strand
Strand 2	B	43	47	parallel
Strand 3	B	11	15	parallel
Strand 4	B	109	113	parallel
Strand 5	B	137	141	parallel
Strand 6	B	167	170	parallel

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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	383	first strand
Strand 2	B	362	371	anti-parallel
Strand 3	B	352	358	anti-parallel
Strand 4	B	326	333	anti-parallel
Strand 5	B	201	209	anti-parallel
Strand 6	B	314	319	parallel
Strand 7	B	297	302	anti-parallel
Strand 8	B	274	279	anti-parallel
Strand 9	B	433	436	parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	87	first strand
Strand 2	C	43	47	parallel
Strand 3	C	11	15	parallel
Strand 4	C	109	113	parallel
Strand 5	C	137	141	parallel
Strand 6	C	167	170	parallel

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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	383	first strand
Strand 2	C	362	371	anti-parallel
Strand 3	C	352	358	anti-parallel
Strand 4	C	326	333	anti-parallel
Strand 5	C	201	209	anti-parallel
Strand 6	C	314	319	parallel
Strand 7	C	297	302	anti-parallel
Strand 8	C	274	279	anti-parallel
Strand 9	C	433	436	parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	87	first strand
Strand 2	D	43	47	parallel
Strand 3	D	11	15	parallel
Strand 4	D	109	113	parallel
Strand 5	D	137	141	parallel
Strand 6	D	167	170	parallel

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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	374	383	first strand
Strand 2	D	362	371	anti-parallel
Strand 3	D	352	358	anti-parallel
Strand 4	D	326	333	anti-parallel
Strand 5	D	201	209	anti-parallel
Strand 6	D	314	319	parallel
Strand 7	D	297	302	anti-parallel
Strand 8	D	274	279	anti-parallel
Strand 9	D	433	436	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4LGV

Analysis of interatomic Contacts of Structural Units in PDB entry:
4LGV