Analysis of interatomic Contacts of Structural Units in PDB entry:
4LHB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LHB entry

There are 3 chains in PDB entry 4LHB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 11GLU 169
B
 LYS 12GLU 169
C
 ALA 10GLU 169
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 4LHB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 27Right-handed alpha
Helix 2
2
A
33 44Right-handed alpha
Helix 3
3
A
57 71Right-handed alpha
Helix 4
4
A
89 95Right-handed alpha
Helix 5
5
A
96 98Right-handed 310
Helix 6
6
A
103 117Right-handed alpha
Helix 7
7
A
118 123Right-handed 310
Helix 8
8
A
145 168Right-handed alpha
Helix 9
9
B
22 27Right-handed alpha
Helix 10
10
B
33 46Right-handed alpha
Helix 11
11
B
57 71Right-handed alpha
Helix 12
12
B
89 95Right-handed alpha
Helix 13
13
B
96 98Right-handed 310
Helix 14
14
B
103 113Right-handed alpha
Helix 15
15
B
114 115Right-handed 310
Helix 16
16
B
116 123Right-handed 310
Helix 17
17
B
145 169Right-handed alpha
Helix 18
18
C
22 28Right-handed alpha
Helix 19
19
C
33 44Right-handed alpha
Helix 20
20
C
57 71Right-handed alpha
Helix 21
21
C
89 95Right-handed alpha
Helix 22
22
C
96 98Right-handed 310
Helix 23
23
C
103 117Right-handed alpha
Helix 24
24
C
118 123Right-handed 310
Helix 25
25
C
145 168Right-handed alpha
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There are 3 sheets in PDB entry 4LHB. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 54first strand
Strand 2
A
15 21parallel
Strand 3
A
75 79parallel
Strand 4
A
136 142parallel
Strand 5
A
126 131anti-parallel
Strand 6
A
100 101anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 54first strand
Strand 2
B
15 21parallel
Strand 3
B
75 79parallel
Strand 4
B
136 142parallel
Strand 5
B
126 131anti-parallel
Strand 6
B
100 101anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 54first strand
Strand 2
C
15 21parallel
Strand 3
C
75 79parallel
Strand 4
C
136 142parallel
Strand 5
C
126 131anti-parallel
Strand 6
C
100 101anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il