Analysis of interatomic Contacts of Structural Units in PDB entry:
4LHS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LHS entry

There is 1 chain in PDB entry 4LHS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 28ALA 364
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4LHS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 37Right-handed 310
Helix 2
2
A
62 69Right-handed alpha
Helix 3
3
A
102 108Right-handed alpha
Helix 4
4
A
186 191Right-handed alpha
Helix 5
5
A
196 199Right-handed 310
Helix 6
6
A
200 210Right-handed alpha
Helix 7
7
A
225 234Right-handed alpha
Helix 8
8
A
249 268Right-handed alpha
Helix 9
9
A
281 286Right-handed 310
Helix 10
10
A
287 311Right-handed alpha
Helix 11
11
A
339 359Right-handed alpha
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There are 4 sheets in PDB entry 4LHS. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 33first strand
Strand 2
A
159 165anti-parallel
Strand 3
A
86 91anti-parallel
Strand 4
A
131 137anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
76 81anti-parallel
Strand 3
A
145 150anti-parallel
Strand 4
A
109 115anti-parallel
Strand 5
A
118 125anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
76 81anti-parallel
Strand 3
A
170 172anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 217first strand
Strand 2
A
178 185parallel
Strand 3
A
239 243parallel
Strand 4
A
273 276parallel
Strand 5
A
316 319parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il