Analysis of interatomic Contacts of Structural Units in PDB entry:
4LJ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LJ6 entry

There is 1 chain in PDB entry 4LJ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 518PRO 849
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4LJ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
522 535Right-handed alpha
Helix 2
2
A
537 542Right-handed alpha
Helix 3
3
A
551 558Right-handed alpha
Helix 4
4
A
563 579Right-handed alpha
Helix 5
5
A
600 614Right-handed alpha
Helix 6
6
A
615 617Right-handed 310
Helix 7
7
A
625 627Right-handed 310
Helix 8
8
A
631 638Right-handed alpha
Helix 9
9
A
650 659Right-handed alpha
Helix 10
10
A
669 672Right-handed 310
Helix 11
11
A
673 687Right-handed alpha
Helix 12
12
A
711 722Right-handed alpha
Helix 13
13
A
724 740Right-handed alpha
Helix 14
14
A
741 746Right-handed alpha
Helix 15
15
A
758 779Right-handed alpha
Helix 16
16
A
787 799Right-handed alpha
Helix 17
17
A
807 816Right-handed alpha
Helix 18
18
A
816 826Right-handed alpha
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There are 3 sheets in PDB entry 4LJ6. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
619 623first strand
Strand 2
A
663 667parallel
Strand 3
A
703 707parallel
Strand 4
A
589 594parallel
Strand 5
A
750 753parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
688 690first strand
Strand 2
A
696 698anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
783 786first strand
Strand 2
A
834 840parallel
Strand 3
A
843 847anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il