Analysis of interatomic Contacts of Structural Units in PDB entry:
4LJY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LJY entry

There is 1 chain in PDB entry 4LJY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 211LYS 673
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4LJY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
222 227Right-handed alpha
Helix 2
2
A
229 240Right-handed alpha
Helix 3
3
A
256 260Right-handed 310
Helix 4
4
A
263 273Right-handed alpha
Helix 5
5
A
280 292Right-handed alpha
Helix 6
6
A
305 320Right-handed alpha
Helix 7
7
A
339 355Right-handed alpha
Helix 8
8
A
371 379Right-handed alpha
Helix 9
9
A
388 396Right-handed alpha
Helix 10
10
A
397 402Right-handed 310
Helix 11
11
A
416 423Right-handed alpha
Helix 12
12
A
425 436Right-handed alpha
Helix 13
13
A
450 461Right-handed alpha
Helix 14
14
A
488 511Right-handed alpha
Helix 15
15
A
534 548Right-handed alpha
Helix 16
16
A
560 574Right-handed alpha
Helix 17
17
A
583 587Right-handed alpha
Helix 18
18
A
605 614Right-handed alpha
Helix 19
19
A
615 617Right-handed 310
Helix 20
20
A
618 622Right-handed 310
Helix 21
21
A
633 644Right-handed alpha
Helix 22
22
A
645 651Right-handed alpha
Helix 23
23
A
653 673Right-handed alpha
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There are 2 sheets in PDB entry 4LJY. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 246first strand
Strand 2
A
465 469anti-parallel
Strand 3
A
296 299parallel
Strand 4
A
441 446parallel
Strand 5
A
411 414parallel
Strand 6
A
333 336parallel
Strand 7
A
384 387parallel
Strand 8
A
362 365parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
480 486first strand
Strand 2
A
624 630parallel
Strand 3
A
596 599parallel
Strand 4
A
528 532parallel
Strand 5
A
578 582parallel
Strand 6
A
553 555parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il