Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 4LKU entry
There are 5 chains in PDB entry 4LKU
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
GLU 108 | SER 136 |
B
|
GLU 108 | SER 136 |
C
|
PRO 113 | SER 136 |
D
|
ALA 112 | SER 136 |
E
|
ALA 114 | SER 136 |
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There are 5
helices in PDB entry 4LKU. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 116 |
135 | Right-handed alpha |
Helix 2 |
2 | B
| 116 |
136 | Right-handed alpha |
Helix 3 |
3 | C
| 116 |
136 | Right-handed alpha |
Helix 4 |
4 | D
| 116 |
136 | Right-handed alpha |
Helix 5 |
5 | E
| 116 |
136 | Right-handed alpha |
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There are no sheets in PDB entry
4LKU
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il