Analysis of interatomic Contacts of Structural Units in PDB entry:
4LL0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LL0 entry

There are 2 chains in PDB entry 4LL0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 697LEU 1017
B
 ALA 698LEU 1017
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4LL0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
708 710Right-handed 310
Helix 2
2
A
752 768Right-handed alpha
Helix 3
3
A
797 805Right-handed alpha
Helix 4
4
A
810 831Right-handed alpha
Helix 5
5
A
839 841Right-handed 310
Helix 6
6
A
882 889Right-handed alpha
Helix 7
7
A
893 908Right-handed alpha
Helix 8
8
A
919 921Right-handed 310
Helix 9
9
A
922 929Right-handed alpha
Helix 10
10
A
940 950Right-handed alpha
Helix 11
11
A
954 958Right-handed 310
Helix 12
12
A
960 972Right-handed alpha
Helix 13
13
A
973 978Right-handed 310
Helix 14
14
B
708 710Right-handed 310
Helix 15
15
B
752 768Right-handed alpha
Helix 16
16
B
797 805Right-handed alpha
Helix 17
17
B
810 831Right-handed alpha
Helix 18
18
B
839 841Right-handed 310
Helix 19
19
B
882 889Right-handed alpha
Helix 20
20
B
892 908Right-handed alpha
Helix 21
21
B
919 921Right-handed 310
Helix 22
22
B
922 929Right-handed alpha
Helix 23
23
B
940 950Right-handed alpha
Helix 24
24
B
954 958Right-handed 310
Helix 25
25
B
960 974Right-handed alpha
Helix 26
26
B
975 978Right-handed 310
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There are 4 sheets in PDB entry 4LL0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
705 707first strand
Strand 2
A
777 781parallel
Strand 3
A
787 791anti-parallel
Strand 4
A
740 746anti-parallel
Strand 5
A
728 731anti-parallel
Strand 6
A
712 716anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
843 847first strand
Strand 2
A
850 853anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
705 707first strand
Strand 2
B
777 781parallel
Strand 3
B
787 791anti-parallel
Strand 4
B
740 746anti-parallel
Strand 5
B
725 731anti-parallel
Strand 6
B
712 720anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
843 847first strand
Strand 2
B
850 853anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il