Analysis of interatomic Contacts of Structural Units in PDB entry:
4LLR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LLR entry

There are 10 chains in PDB entry 4LLR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 4ALA 197
B
 GLY 4ALA 197
C
 GLY 4ALA 197
D
 GLY 4ALA 197
E
 GLY 4ALA 197
F
 GLY 4ALA 197
G
 GLY 4ALA 197
H
 GLY 4ALA 197
I
 GLY 4ALA 197
J
 GLY 4ALA 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 4LLR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 35Right-handed 310
Helix 2
2
A
50 62Right-handed alpha
Helix 3
3
A
62 68Right-handed alpha
Helix 4
4
A
80 89Right-handed alpha
Helix 5
5
A
90 95Right-handed 310
Helix 6
6
A
110 117Right-handed alpha
Helix 7
7
A
152 170Right-handed alpha
Helix 8
8
A
191 196Right-handed alpha
Helix 9
9
B
32 35Right-handed 310
Helix 10
10
B
50 62Right-handed alpha
Helix 11
11
B
62 68Right-handed alpha
Helix 12
12
B
80 89Right-handed alpha
Helix 13
13
B
90 95Right-handed 310
Helix 14
14
B
110 117Right-handed alpha
Helix 15
15
B
152 170Right-handed alpha
Helix 16
16
B
191 196Right-handed alpha
Helix 17
17
C
32 35Right-handed 310
Helix 18
18
C
50 62Right-handed alpha
Helix 19
19
C
62 68Right-handed alpha
Helix 20
20
C
80 89Right-handed alpha
Helix 21
21
C
90 95Right-handed 310
Helix 22
22
C
110 116Right-handed alpha
Helix 23
23
C
152 170Right-handed alpha
Helix 24
24
C
191 196Right-handed alpha
Helix 25
25
D
32 35Right-handed 310
Helix 26
26
D
50 62Right-handed alpha
Helix 27
27
D
62 68Right-handed alpha
Helix 28
28
D
80 89Right-handed alpha
Helix 29
29
D
90 95Right-handed 310
Helix 30
30
D
110 116Right-handed alpha
Helix 31
31
D
152 170Right-handed alpha
Helix 32
32
D
191 196Right-handed alpha
Helix 33
33
E
32 35Right-handed 310
Helix 34
34
E
50 62Right-handed alpha
Helix 35
35
E
62 68Right-handed alpha
Helix 36
36
E
80 89Right-handed alpha
Helix 37
37
E
90 95Right-handed 310
Helix 38
38
E
110 116Right-handed alpha
Helix 39
39
E
152 170Right-handed alpha
Helix 40
40
E
191 196Right-handed alpha
Helix 41
41
F
32 35Right-handed 310
Helix 42
42
F
50 62Right-handed alpha
Helix 43
43
F
62 68Right-handed alpha
Helix 44
44
F
80 89Right-handed alpha
Helix 45
45
F
90 95Right-handed 310
Helix 46
46
F
110 116Right-handed alpha
Helix 47
47
F
152 170Right-handed alpha
Helix 48
48
F
191 196Right-handed alpha
Helix 49
49
G
32 35Right-handed 310
Helix 50
50
G
50 62Right-handed alpha
Helix 51
51
G
62 68Right-handed alpha
Helix 52
52
G
80 89Right-handed alpha
Helix 53
53
G
90 95Right-handed 310
Helix 54
54
G
110 117Right-handed alpha
Helix 55
55
G
152 170Right-handed alpha
Helix 56
56
G
191 196Right-handed alpha
Helix 57
57
H
32 35Right-handed 310
Helix 58
58
H
50 62Right-handed alpha
Helix 59
59
H
62 68Right-handed alpha
Helix 60
60
H
80 89Right-handed alpha
Helix 61
61
H
90 95Right-handed 310
Helix 62
62
H
110 116Right-handed alpha
Helix 63
63
H
152 170Right-handed alpha
Helix 64
64
H
191 196Right-handed alpha
Helix 65
65
I
32 35Right-handed 310
Helix 66
66
I
50 62Right-handed alpha
Helix 67
67
I
62 68Right-handed alpha
Helix 68
68
I
80 89Right-handed alpha
Helix 69
69
I
90 95Right-handed 310
Helix 70
70
I
110 117Right-handed alpha
Helix 71
71
I
152 170Right-handed alpha
Helix 72
72
I
191 196Right-handed alpha
Helix 73
73
J
32 35Right-handed 310
Helix 74
74
J
50 62Right-handed alpha
Helix 75
75
J
62 68Right-handed alpha
Helix 76
76
J
80 89Right-handed alpha
Helix 77
77
J
90 95Right-handed 310
Helix 78
78
J
110 117Right-handed alpha
Helix 79
79
J
152 170Right-handed alpha
Helix 80
80
J
191 196Right-handed alpha
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There are 8 sheets in PDB entry 4LLR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
16 20anti-parallel
Strand 3
A
104 106anti-parallel
Strand 4
A
71 77parallel
Strand 5
A
38 43parallel
Strand 6
A
128 133anti-parallel
Strand 7
A
139 145anti-parallel
Strand 8
B
139 145anti-parallel
Strand 9
B
128 133anti-parallel
Strand 10
B
38 43anti-parallel
Strand 11
B
71 77parallel
Strand 12
B
104 106parallel
Strand 13
B
16 20anti-parallel
Strand 14
B
26 30anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
125 126anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 120first strand
Strand 2
B
125 126anti-parallel
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There are 14 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 30first strand
Strand 2
C
16 20anti-parallel
Strand 3
C
104 106anti-parallel
Strand 4
C
71 77parallel
Strand 5
C
38 43parallel
Strand 6
C
128 133anti-parallel
Strand 7
C
139 145anti-parallel
Strand 8
D
139 145anti-parallel
Strand 9
D
128 133anti-parallel
Strand 10
D
38 43anti-parallel
Strand 11
D
71 77parallel
Strand 12
D
104 106parallel
Strand 13
D
16 20anti-parallel
Strand 14
D
26 30anti-parallel
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There are 14 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
26 30first strand
Strand 2
E
16 20anti-parallel
Strand 3
E
104 106anti-parallel
Strand 4
E
71 77parallel
Strand 5
E
38 43parallel
Strand 6
E
128 133anti-parallel
Strand 7
E
139 145anti-parallel
Strand 8
F
139 145anti-parallel
Strand 9
F
128 133anti-parallel
Strand 10
F
38 43anti-parallel
Strand 11
F
71 77parallel
Strand 12
F
104 106parallel
Strand 13
F
16 20anti-parallel
Strand 14
F
26 30anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
119 120first strand
Strand 2
F
125 126anti-parallel
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There are 14 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
26 30first strand
Strand 2
G
16 20anti-parallel
Strand 3
G
104 106anti-parallel
Strand 4
G
71 77parallel
Strand 5
G
38 43parallel
Strand 6
G
128 133anti-parallel
Strand 7
G
139 145anti-parallel
Strand 8
H
139 145anti-parallel
Strand 9
H
128 133anti-parallel
Strand 10
H
38 43anti-parallel
Strand 11
H
71 77parallel
Strand 12
H
104 106parallel
Strand 13
H
16 20anti-parallel
Strand 14
H
26 30anti-parallel
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There are 14 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
26 30first strand
Strand 2
I
16 20anti-parallel
Strand 3
I
104 106anti-parallel
Strand 4
I
71 77parallel
Strand 5
I
38 43parallel
Strand 6
I
128 133anti-parallel
Strand 7
I
139 145anti-parallel
Strand 8
J
139 145anti-parallel
Strand 9
J
128 133anti-parallel
Strand 10
J
38 43anti-parallel
Strand 11
J
71 77parallel
Strand 12
J
104 106parallel
Strand 13
J
16 20anti-parallel
Strand 14
J
26 30anti-parallel
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