Analysis of interatomic Contacts of Structural Units in PDB entry:
4LMG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LMG entry

There are 8 chains in PDB entry 4LMG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 42PRO 179
B
 LEU 42LEU 180
C
 LEU 42LEU 180
D
 LEU 42LEU 180
E
 T 1 T 13
F
 A 15 T 26
G
 T 1 T 13
H
 A 14 T 26
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4LMG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 55Right-handed 310
Helix 2
2
A
56 66Right-handed alpha
Helix 3
3
A
67 69Right-handed 310
Helix 4
4
A
138 143Right-handed alpha
Helix 5
5
A
145 158Right-handed alpha
Helix 6
6
A
160 176Right-handed alpha
Helix 7
7
B
56 66Right-handed alpha
Helix 8
8
B
67 69Right-handed 310
Helix 9
9
B
138 143Right-handed alpha
Helix 10
10
B
145 158Right-handed alpha
Helix 11
11
B
160 176Right-handed alpha
Helix 12
12
C
53 55Right-handed 310
Helix 13
13
C
56 66Right-handed alpha
Helix 14
14
C
67 69Right-handed 310
Helix 15
15
C
138 143Right-handed alpha
Helix 16
16
C
145 158Right-handed alpha
Helix 17
17
C
160 176Right-handed alpha
Helix 18
18
D
53 55Right-handed 310
Helix 19
19
D
56 66Right-handed alpha
Helix 20
20
D
67 69Right-handed 310
Helix 21
21
D
138 143Right-handed alpha
Helix 22
22
D
145 158Right-handed alpha
Helix 23
23
D
160 176Right-handed alpha
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There are 4 sheets in PDB entry 4LMG. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
123 129anti-parallel
Strand 3
A
112 118anti-parallel
Strand 4
A
81 86anti-parallel
Strand 5
A
72 78anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
123 129anti-parallel
Strand 3
B
112 118anti-parallel
Strand 4
B
81 86anti-parallel
Strand 5
B
72 77anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 44first strand
Strand 2
C
123 130anti-parallel
Strand 3
C
112 118anti-parallel
Strand 4
C
81 86anti-parallel
Strand 5
C
72 78anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 44first strand
Strand 2
D
123 129anti-parallel
Strand 3
D
112 118anti-parallel
Strand 4
D
81 86anti-parallel
Strand 5
D
72 78anti-parallel
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