Analysis of interatomic Contacts of Structural Units in PDB entry:
4LMV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LMV entry

There are 6 chains in PDB entry 4LMV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ASP 253
B
 SER 2ASP 253
C
 SER 2ASP 253
D
 SER 2ASP 253
E
 SER 2ASP 253
F
 SER 2ASP 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 4LMV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 17Right-handed 310
Helix 2
2
A
24 36Right-handed alpha
Helix 3
3
A
45 47Right-handed 310
Helix 4
4
A
48 56Right-handed alpha
Helix 5
5
A
79 82Right-handed 310
Helix 6
6
A
87 98Right-handed alpha
Helix 7
7
A
110 122Right-handed alpha
Helix 8
8
A
126 140Right-handed alpha
Helix 9
9
A
143 159Right-handed alpha
Helix 10
10
A
161 165Right-handed 310
Helix 11
11
A
167 187Right-handed alpha
Helix 12
12
A
204 222Right-handed alpha
Helix 13
13
A
225 234Right-handed alpha
Helix 14
14
A
237 245Right-handed alpha
Helix 15
15
A
246 250Right-handed 310
Helix 16
16
B
13 17Right-handed 310
Helix 17
17
B
22 36Right-handed alpha
Helix 18
18
B
45 47Right-handed 310
Helix 19
19
B
48 57Right-handed alpha
Helix 20
20
B
79 82Right-handed 310
Helix 21
21
B
87 98Right-handed alpha
Helix 22
22
B
110 122Right-handed alpha
Helix 23
23
B
126 140Right-handed alpha
Helix 24
24
B
143 159Right-handed alpha
Helix 25
25
B
161 165Right-handed 310
Helix 26
26
B
167 187Right-handed alpha
Helix 27
27
B
204 222Right-handed alpha
Helix 28
28
B
225 245Right-handed alpha
Helix 29
29
B
246 250Right-handed 310
Helix 30
30
C
13 17Right-handed 310
Helix 31
31
C
22 36Right-handed alpha
Helix 32
32
C
45 47Right-handed 310
Helix 33
33
C
48 57Right-handed alpha
Helix 34
34
C
87 98Right-handed alpha
Helix 35
35
C
110 122Right-handed alpha
Helix 36
36
C
126 140Right-handed alpha
Helix 37
37
C
143 159Right-handed alpha
Helix 38
38
C
161 165Right-handed 310
Helix 39
39
C
167 187Right-handed alpha
Helix 40
40
C
204 222Right-handed alpha
Helix 41
41
C
225 245Right-handed alpha
Helix 42
42
C
246 250Right-handed 310
Helix 43
43
D
22 36Right-handed alpha
Helix 44
44
D
45 47Right-handed 310
Helix 45
45
D
48 57Right-handed alpha
Helix 46
46
D
79 82Right-handed 310
Helix 47
47
D
87 98Right-handed alpha
Helix 48
48
D
110 122Right-handed alpha
Helix 49
49
D
126 140Right-handed alpha
Helix 50
50
D
143 159Right-handed alpha
Helix 51
51
D
161 165Right-handed 310
Helix 52
52
D
167 187Right-handed alpha
Helix 53
53
D
204 222Right-handed alpha
Helix 54
54
D
225 232Right-handed alpha
Helix 55
55
D
233 245Right-handed alpha
Helix 56
56
D
246 250Right-handed 310
Helix 57
57
E
13 17Right-handed 310
Helix 58
58
E
22 36Right-handed alpha
Helix 59
59
E
45 47Right-handed 310
Helix 60
60
E
48 57Right-handed alpha
Helix 61
61
E
79 82Right-handed 310
Helix 62
62
E
87 98Right-handed alpha
Helix 63
63
E
110 122Right-handed alpha
Helix 64
64
E
126 140Right-handed alpha
Helix 65
65
E
143 159Right-handed alpha
Helix 66
66
E
161 165Right-handed 310
Helix 67
67
E
167 187Right-handed alpha
Helix 68
68
E
204 222Right-handed alpha
Helix 69
69
E
225 232Right-handed alpha
Helix 70
70
E
233 245Right-handed alpha
Helix 71
71
E
246 250Right-handed 310
Helix 72
72
F
13 17Right-handed 310
Helix 73
73
F
22 36Right-handed alpha
Helix 74
74
F
45 47Right-handed 310
Helix 75
75
F
48 57Right-handed alpha
Helix 76
76
F
79 82Right-handed 310
Helix 77
77
F
87 98Right-handed alpha
Helix 78
78
F
110 122Right-handed alpha
Helix 79
79
F
126 140Right-handed alpha
Helix 80
80
F
143 159Right-handed alpha
Helix 81
81
F
161 165Right-handed 310
Helix 82
82
F
167 187Right-handed alpha
Helix 83
83
F
204 222Right-handed alpha
Helix 84
84
F
225 245Right-handed alpha
Helix 85
85
F
246 250Right-handed 310
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There are 12 sheets in PDB entry 4LMV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 43first strand
Strand 2
A
5 9parallel
Strand 3
A
75 78anti-parallel
Strand 4
A
83 86anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
A
69 70anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 43first strand
Strand 2
B
5 9parallel
Strand 3
B
75 78anti-parallel
Strand 4
B
83 86anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 63first strand
Strand 2
B
69 70anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
39 43first strand
Strand 2
C
5 9parallel
Strand 3
C
75 78anti-parallel
Strand 4
C
83 86anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
62 63first strand
Strand 2
C
69 70anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 43first strand
Strand 2
D
5 9parallel
Strand 3
D
75 78anti-parallel
Strand 4
D
83 86anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
62 63first strand
Strand 2
D
69 70anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
39 43first strand
Strand 2
E
5 9parallel
Strand 3
E
75 78anti-parallel
Strand 4
E
83 86anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
62 63first strand
Strand 2
E
69 70anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
39 43first strand
Strand 2
F
5 9parallel
Strand 3
F
75 78anti-parallel
Strand 4
F
83 86anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
62 63first strand
Strand 2
F
69 70anti-parallel
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