Analysis of interatomic Contacts of Structural Units in PDB entry:
4LN8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4LN8 entry

There are 6 chains in PDB entry 4LN8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1	GLU 316
B	ALA 5	ILE 171
C	ASP 1	GLU 316
D	ALA 5	ILE 171
E	ASP 1	GLU 316
F	ALA 5	ILE 10

There are 48 helices in PDB entry 4LN8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	57	62	Right-handed alpha
Helix 2	2	A	63	70	Right-handed 310
Helix 3	3	A	94	104	Right-handed alpha
Helix 4	4	A	178	187	Right-handed alpha
Helix 5	5	B	37	56	Right-handed alpha
Helix 6	6	B	74	127	Right-handed alpha
Helix 7	7	B	145	154	Right-handed alpha
Helix 8	8	B	158	170	Right-handed alpha
Helix 9	9	C	57	62	Right-handed alpha
Helix 10	10	C	63	70	Right-handed 310
Helix 11	11	C	94	104	Right-handed alpha
Helix 12	12	C	180	187	Right-handed alpha
Helix 13	13	D	37	56	Right-handed alpha
Helix 14	14	D	74	127	Right-handed alpha
Helix 15	15	D	145	154	Right-handed alpha
Helix 16	16	D	158	170	Right-handed alpha
Helix 17	17	E	57	62	Right-handed alpha
Helix 18	18	E	63	70	Right-handed 310
Helix 19	19	E	94	104	Right-handed alpha
Helix 20	20	E	180	187	Right-handed alpha
Helix 21	21	F	37	56	Right-handed alpha
Helix 22	22	F	74	127	Right-handed alpha
Helix 23	23	F	145	154	Right-handed alpha
Helix 24	24	F	158	170	Right-handed alpha
Helix 25	25	G	57	62	Right-handed alpha
Helix 26	26	G	63	70	Right-handed 310
Helix 27	27	G	94	104	Right-handed alpha
Helix 28	28	G	178	187	Right-handed alpha
Helix 29	29	H	37	56	Right-handed alpha
Helix 30	30	H	74	127	Right-handed alpha
Helix 31	31	H	145	154	Right-handed alpha
Helix 32	32	H	158	170	Right-handed alpha
Helix 33	33	I	57	62	Right-handed alpha
Helix 34	34	I	63	70	Right-handed 310
Helix 35	35	I	94	104	Right-handed alpha
Helix 36	36	I	180	187	Right-handed alpha
Helix 37	37	J	37	56	Right-handed alpha
Helix 38	38	J	74	127	Right-handed alpha
Helix 39	39	J	145	154	Right-handed alpha
Helix 40	40	J	158	170	Right-handed alpha
Helix 41	41	K	57	62	Right-handed alpha
Helix 42	42	K	63	70	Right-handed 310
Helix 43	43	K	94	104	Right-handed alpha
Helix 44	44	K	180	187	Right-handed alpha
Helix 45	45	L	37	56	Right-handed alpha
Helix 46	46	L	74	127	Right-handed alpha
Helix 47	47	L	145	154	Right-handed alpha
Helix 48	48	L	158	170	Right-handed alpha

There are 72 sheets in PDB entry 4LN8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, BL, BM, BN, BO, BP, BQ, BR, BS, BT,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	36	first strand
Strand 2	B	22	28	anti-parallel
Strand 3	A	2	7	anti-parallel
Strand 4	B	137	140	anti-parallel
Strand 5	B	130	132	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	16	first strand
Strand 2	A	24	26	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	306	308	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	34	first strand
Strand 2	A	285	286	parallel
Strand 3	A	298	299	parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	42	first strand
Strand 2	A	264	265	parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	50	first strand
Strand 2	A	76	79	parallel
Strand 3	A	256	259	parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	112	first strand
Strand 2	A	247	251	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	121	first strand
Strand 2	A	144	145	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	130	first strand
Strand 2	A	134	135	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	142	first strand
Strand 2	A	242	245	anti-parallel
Strand 3	A	167	175	anti-parallel
Strand 4	A	220	228	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	155	160	first strand
Strand 2	A	233	238	anti-parallel
Strand 3	A	193	196	anti-parallel
Strand 4	A	201	204	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	277	278	first strand
Strand 2	A	272	274	anti-parallel
Strand 3	A	293	294	anti-parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	31	36	first strand
Strand 2	D	22	28	anti-parallel
Strand 3	C	2	7	anti-parallel
Strand 4	D	137	140	anti-parallel
Strand 5	D	130	132	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	16	first strand
Strand 2	C	24	26	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	31	first strand
Strand 2	C	306	308	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	34	first strand
Strand 2	C	285	286	parallel
Strand 3	C	298	299	parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	42	first strand
Strand 2	C	264	265	parallel

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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	50	first strand
Strand 2	C	76	79	parallel
Strand 3	C	256	259	parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	112	first strand
Strand 2	C	247	251	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	121	first strand
Strand 2	C	144	145	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	130	first strand
Strand 2	C	134	135	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	142	first strand
Strand 2	C	242	245	anti-parallel
Strand 3	C	167	175	anti-parallel
Strand 4	C	220	228	anti-parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	155	160	first strand
Strand 2	C	233	238	anti-parallel
Strand 3	C	193	196	anti-parallel
Strand 4	C	201	204	anti-parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	277	278	first strand
Strand 2	C	272	274	anti-parallel
Strand 3	C	293	294	anti-parallel

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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	31	36	first strand
Strand 2	F	22	28	anti-parallel
Strand 3	E	2	7	anti-parallel
Strand 4	F	137	140	anti-parallel
Strand 5	F	130	132	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	14	16	first strand
Strand 2	E	24	26	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	31	first strand
Strand 2	E	306	308	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	34	first strand
Strand 2	E	285	286	parallel
Strand 3	E	298	299	parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	41	42	first strand
Strand 2	E	264	265	parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	48	50	first strand
Strand 2	E	76	79	parallel
Strand 3	E	256	259	parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	108	112	first strand
Strand 2	E	247	251	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	121	first strand
Strand 2	E	144	145	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	126	130	first strand
Strand 2	E	134	135	anti-parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	140	142	first strand
Strand 2	E	242	245	anti-parallel
Strand 3	E	167	175	anti-parallel
Strand 4	E	220	228	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	155	160	first strand
Strand 2	E	233	238	anti-parallel
Strand 3	E	193	196	anti-parallel
Strand 4	E	201	204	anti-parallel

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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	277	278	first strand
Strand 2	E	272	274	anti-parallel
Strand 3	E	293	294	anti-parallel

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There are 5 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	31	36	first strand
Strand 2	H	22	28	anti-parallel
Strand 3	G	2	7	anti-parallel
Strand 4	H	137	140	anti-parallel
Strand 5	H	130	132	anti-parallel

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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	14	16	first strand
Strand 2	G	24	26	anti-parallel

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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	31	first strand
Strand 2	G	306	308	anti-parallel

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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	33	34	first strand
Strand 2	G	285	286	parallel
Strand 3	G	298	299	parallel

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There are 2 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	41	42	first strand
Strand 2	G	264	265	parallel

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There are 3 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	48	50	first strand
Strand 2	G	76	79	parallel
Strand 3	G	256	259	parallel

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There are 2 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	112	first strand
Strand 2	G	247	251	anti-parallel

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There are 2 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	120	121	first strand
Strand 2	G	144	145	anti-parallel

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There are 2 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	126	130	first strand
Strand 2	G	134	135	anti-parallel

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There are 4 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	140	142	first strand
Strand 2	G	242	245	anti-parallel
Strand 3	G	167	175	anti-parallel
Strand 4	G	220	228	anti-parallel

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There are 4 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	155	160	first strand
Strand 2	G	233	238	anti-parallel
Strand 3	G	193	196	anti-parallel
Strand 4	G	201	204	anti-parallel

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There are 4 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	277	278	first strand
Strand 2	G	272	274	anti-parallel
Strand 3	G	293	295	anti-parallel
Strand 4	H	62	63	anti-parallel

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There are 5 strands in AW sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	31	36	first strand
Strand 2	J	22	28	anti-parallel
Strand 3	I	2	7	anti-parallel
Strand 4	J	137	140	anti-parallel
Strand 5	J	130	132	anti-parallel

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There are 2 strands in AX sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	14	16	first strand
Strand 2	I	24	26	anti-parallel

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There are 2 strands in AY sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	29	31	first strand
Strand 2	I	306	308	anti-parallel

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There are 3 strands in AZ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	33	34	first strand
Strand 2	I	285	286	parallel
Strand 3	I	298	299	parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	41	42	first strand
Strand 2	I	264	265	parallel

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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	48	50	first strand
Strand 2	I	76	79	parallel
Strand 3	I	256	259	parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	108	112	first strand
Strand 2	I	247	251	anti-parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	120	121	first strand
Strand 2	I	144	145	anti-parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	126	130	first strand
Strand 2	I	134	135	anti-parallel

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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	140	142	first strand
Strand 2	I	242	245	anti-parallel
Strand 3	I	167	175	anti-parallel
Strand 4	I	220	228	anti-parallel

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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	155	160	first strand
Strand 2	I	233	238	anti-parallel
Strand 3	I	193	196	anti-parallel
Strand 4	I	201	204	anti-parallel

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There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	277	278	first strand
Strand 2	I	272	274	anti-parallel
Strand 3	I	293	295	anti-parallel
Strand 4	J	62	63	anti-parallel

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There are 5 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	31	36	first strand
Strand 2	L	22	28	anti-parallel
Strand 3	K	2	7	anti-parallel
Strand 4	L	137	140	anti-parallel
Strand 5	L	130	132	anti-parallel

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There are 2 strands in BJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	14	16	first strand
Strand 2	K	24	26	anti-parallel

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There are 2 strands in BK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	29	31	first strand
Strand 2	K	306	308	anti-parallel

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There are 3 strands in BL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	33	34	first strand
Strand 2	K	285	286	parallel
Strand 3	K	298	299	parallel

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There are 2 strands in BM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	41	42	first strand
Strand 2	K	264	265	parallel

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There are 3 strands in BN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	48	50	first strand
Strand 2	K	76	79	parallel
Strand 3	K	256	259	parallel

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There are 2 strands in BO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	108	112	first strand
Strand 2	K	247	251	anti-parallel

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There are 2 strands in BP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	120	121	first strand
Strand 2	K	144	145	anti-parallel

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There are 2 strands in BQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	126	130	first strand
Strand 2	K	134	135	anti-parallel

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There are 4 strands in BR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	140	142	first strand
Strand 2	K	242	245	anti-parallel
Strand 3	K	167	175	anti-parallel
Strand 4	K	220	228	anti-parallel

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There are 4 strands in BS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	155	160	first strand
Strand 2	K	233	238	anti-parallel
Strand 3	K	193	196	anti-parallel
Strand 4	K	201	204	anti-parallel

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There are 4 strands in BT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	277	278	first strand
Strand 2	K	272	274	anti-parallel
Strand 3	K	293	295	anti-parallel
Strand 4	L	62	63	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4LN8

Analysis of interatomic Contacts of Structural Units in PDB entry:
4LN8