Analysis of interatomic Contacts of Structural Units in PDB entry:
4LNB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LNB entry

There are 2 chains in PDB entry 4LNB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3ILE 349
B
 VAL 90LEU 541
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 4LNB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 12Right-handed 310
Helix 2
2
A
36 52Right-handed alpha
Helix 3
3
A
56 70Right-handed alpha
Helix 4
4
A
73 87Right-handed alpha
Helix 5
5
A
90 105Right-handed alpha
Helix 6
6
A
109 120Right-handed alpha
Helix 7
7
A
131 141Right-handed alpha
Helix 8
8
A
146 161Right-handed alpha
Helix 9
9
A
165 179Right-handed alpha
Helix 10
10
A
182 195Right-handed alpha
Helix 11
11
A
212 216Right-handed 310
Helix 12
12
A
223 241Right-handed alpha
Helix 13
13
A
244 259Right-handed alpha
Helix 14
14
A
261 264Right-handed 310
Helix 15
15
A
265 271Right-handed alpha
Helix 16
16
A
289 302Right-handed alpha
Helix 17
17
A
308 323Right-handed alpha
Helix 18
18
A
325 327Right-handed 310
Helix 19
19
A
328 349Right-handed alpha
Helix 20
20
B
95 99Right-handed 310
Helix 21
21
B
110 128Right-handed alpha
Helix 22
22
B
147 158Right-handed alpha
Helix 23
23
B
163 171Right-handed 310
Helix 24
24
B
172 187Right-handed alpha
Helix 25
25
B
191 193Right-handed 310
Helix 26
26
B
194 204Right-handed alpha
Helix 27
27
B
221 236Right-handed alpha
Helix 28
28
B
237 242Right-handed alpha
Helix 29
29
B
245 257Right-handed alpha
Helix 30
30
B
272 286Right-handed alpha
Helix 31
31
B
296 302Right-handed 310
Helix 32
32
B
309 316Right-handed alpha
Helix 33
33
B
333 345Right-handed alpha
Helix 34
34
B
349 358Right-handed alpha
Helix 35
35
B
359 369Right-handed alpha
Helix 36
36
B
389 394Right-handed alpha
Helix 37
37
B
396 407Right-handed alpha
Helix 38
38
B
424 436Right-handed alpha
Helix 39
39
B
452 467Right-handed alpha
Helix 40
40
B
484 487Right-handed 310
Helix 41
41
B
508 512Right-handed 310
Helix 42
42
B
523 536Right-handed alpha
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There are 2 sheets in PDB entry 4LNB. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 274first strand
Strand 2
A
286 287anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
468 472first strand
Strand 2
B
489 493anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il