Analysis of interatomic Contacts of Structural Units in PDB entry:
4LRL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LRL entry

There are 3 chains in PDB entry 4LRL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0LYS 456
B
 THR 2LYS 456
C
 THR 2TRP 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are121 helices in PDB entry 4LRL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 7Right-handed 310
Helix 2
2
A
29 37Right-handed alpha
Helix 3
3
A
37 42Right-handed alpha
Helix 4
4
A
43 46Right-handed 310
Helix 5
5
A
49 55Right-handed 310
Helix 6
6
A
62 85Right-handed alpha
Helix 7
7
A
86 91Right-handed alpha
Helix 8
8
A
96 98Right-handed 310
Helix 9
9
A
99 110Right-handed alpha
Helix 10
10
A
117 126Right-handed alpha
Helix 11
11
A
128 139Right-handed alpha
Helix 12
12
A
142 152Right-handed alpha
Helix 13
13
A
154 164Right-handed alpha
Helix 14
14
A
169 177Right-handed alpha
Helix 15
15
A
181 196Right-handed alpha
Helix 16
16
A
203 210Right-handed alpha
Helix 17
17
A
224 242Right-handed alpha
Helix 18
18
A
245 268Right-handed alpha
Helix 19
19
A
280 285Right-handed alpha
Helix 20
20
A
289 295Right-handed alpha
Helix 21
21
A
297 309Right-handed alpha
Helix 22
22
A
313 326Right-handed alpha
Helix 23
23
A
336 354Right-handed alpha
Helix 24
24
A
357 362Right-handed alpha
Helix 25
25
A
368 370Right-handed 310
Helix 26
26
A
381 385Right-handed 310
Helix 27
27
A
398 402Right-handed alpha
Helix 28
28
A
402 410Right-handed alpha
Helix 29
29
A
421 425Right-handed 310
Helix 30
30
A
436 445Right-handed alpha
Helix 31
31
B
4 7Right-handed 310
Helix 32
32
B
29 37Right-handed alpha
Helix 33
33
B
37 42Right-handed alpha
Helix 34
34
B
43 46Right-handed 310
Helix 35
35
B
51 55Right-handed 310
Helix 36
36
B
62 85Right-handed alpha
Helix 37
37
B
86 91Right-handed alpha
Helix 38
38
B
92 94Right-handed 310
Helix 39
39
B
96 98Right-handed 310
Helix 40
40
B
99 110Right-handed alpha
Helix 41
41
B
117 126Right-handed alpha
Helix 42
42
B
128 139Right-handed alpha
Helix 43
43
B
142 152Right-handed alpha
Helix 44
44
B
154 164Right-handed alpha
Helix 45
45
B
169 177Right-handed alpha
Helix 46
46
B
181 196Right-handed alpha
Helix 47
47
B
203 210Right-handed alpha
Helix 48
48
B
224 242Right-handed alpha
Helix 49
49
B
245 267Right-handed alpha
Helix 50
50
B
280 285Right-handed alpha
Helix 51
51
B
289 295Right-handed alpha
Helix 52
52
B
297 309Right-handed alpha
Helix 53
53
B
313 325Right-handed alpha
Helix 54
54
B
339 354Right-handed alpha
Helix 55
55
B
357 362Right-handed alpha
Helix 56
56
B
398 402Right-handed alpha
Helix 57
57
B
402 410Right-handed alpha
Helix 58
58
B
421 426Right-handed 310
Helix 59
59
B
436 445Right-handed alpha
Helix 60
60
C
4 7Right-handed 310
Helix 61
61
C
29 37Right-handed alpha
Helix 62
62
C
37 42Right-handed alpha
Helix 63
63
C
43 46Right-handed 310
Helix 64
64
C
49 55Right-handed 310
Helix 65
65
C
62 85Right-handed alpha
Helix 66
66
C
86 91Right-handed alpha
Helix 67
67
C
92 94Right-handed 310
Helix 68
68
C
96 98Right-handed 310
Helix 69
69
C
99 110Right-handed alpha
Helix 70
70
C
117 126Right-handed alpha
Helix 71
71
C
128 139Right-handed alpha
Helix 72
72
C
142 152Right-handed alpha
Helix 73
73
C
154 164Right-handed alpha
Helix 74
74
C
169 177Right-handed alpha
Helix 75
75
C
181 196Right-handed alpha
Helix 76
76
C
203 210Right-handed alpha
Helix 77
77
C
224 242Right-handed alpha
Helix 78
78
C
245 268Right-handed alpha
Helix 79
79
C
280 285Right-handed alpha
Helix 80
80
C
289 295Right-handed alpha
Helix 81
81
C
297 309Right-handed alpha
Helix 82
82
C
313 325Right-handed alpha
Helix 83
83
C
336 354Right-handed alpha
Helix 84
84
C
357 362Right-handed alpha
Helix 85
85
C
366 370Right-handed 310
Helix 86
86
C
381 385Right-handed 310
Helix 87
87
C
398 402Right-handed alpha
Helix 88
88
C
402 411Right-handed alpha
Helix 89
89
C
421 425Right-handed 310
Helix 90
90
C
436 445Right-handed alpha
Helix 91
91
D
4 7Right-handed 310
Helix 92
92
D
29 37Right-handed alpha
Helix 93
93
D
37 42Right-handed alpha
Helix 94
94
D
43 45Right-handed 310
Helix 95
95
D
51 55Right-handed 310
Helix 96
96
D
62 85Right-handed alpha
Helix 97
97
D
86 91Right-handed alpha
Helix 98
98
D
92 94Right-handed 310
Helix 99
99
D
96 98Right-handed 310
Helix 100
100
D
99 110Right-handed alpha
Helix 101
101
D
117 126Right-handed alpha
Helix 102
102
D
128 139Right-handed alpha
Helix 103
103
D
142 152Right-handed alpha
Helix 104
104
D
154 164Right-handed alpha
Helix 105
105
D
169 177Right-handed alpha
Helix 106
106
D
181 196Right-handed alpha
Helix 107
107
D
203 210Right-handed alpha
Helix 108
108
D
224 242Right-handed alpha
Helix 109
109
D
245 268Right-handed alpha
Helix 110
110
D
277 279Right-handed 310
Helix 111
111
D
280 286Right-handed alpha
Helix 112
112
D
289 294Right-handed alpha
Helix 113
113
D
297 309Right-handed alpha
Helix 114
114
D
313 325Right-handed alpha
Helix 115
115
D
340 355Right-handed alpha
Helix 116
116
D
357 362Right-handed alpha
Helix 117
117
D
366 370Right-handed 310
Helix 118
118
D
381 385Right-handed 310
Helix 119
119
D
398 402Right-handed alpha
Helix 120
120
D
402 411Right-handed alpha
Helix 121
121
D
421 425Right-handed 310
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There are 14 sheets in PDB entry 4LRL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 18first strand
Strand 2
A
22 28anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 214first strand
Strand 2
A
217 221anti-parallel
Strand 3
A
387 389parallel
Strand 4
A
395 397anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 333first strand
Strand 2
A
416 420anti-parallel
Strand 3
A
363 366anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 448first strand
Strand 2
A
451 452anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 18first strand
Strand 2
B
22 28anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 214first strand
Strand 2
B
217 221anti-parallel
Strand 3
B
387 389parallel
Strand 4
B
395 397anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
330 333first strand
Strand 2
B
416 420anti-parallel
Strand 3
B
363 366anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 18first strand
Strand 2
C
22 28anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
211 214first strand
Strand 2
C
217 221anti-parallel
Strand 3
C
387 389parallel
Strand 4
C
395 397anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
330 333first strand
Strand 2
C
417 420anti-parallel
Strand 3
C
363 365anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
447 448first strand
Strand 2
C
451 452anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 18first strand
Strand 2
D
22 28anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
211 214first strand
Strand 2
D
217 221anti-parallel
Strand 3
D
387 389parallel
Strand 4
D
395 397anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
330 333first strand
Strand 2
D
417 420anti-parallel
Strand 3
D
363 365anti-parallel
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