Analysis of interatomic Contacts of Structural Units in PDB entry:
4LVH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4LVH entry

There are 12 chains in PDB entry 4LVH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 49	GLU 427
B	LYS 2	ALA 222
C	ILE 1	ASN 210
D	PRO 49	THR 270
E	LYS 2	ALA 222
F	ILE 1	ASN 210
G	PRO 49	THR 270
H	LYS 2	ALA 222
I	ILE 1	ASN 210
J	PRO 49	THR 270
K	LYS 2	ALA 222
L	ILE 1	ASN 210

There are 28 helices in PDB entry 4LVH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	56	63	Right-handed alpha
Helix 2	2	A	97	105	Right-handed alpha
Helix 3	3	A	184	190	Right-handed alpha
Helix 4	4	B	86	90	Right-handed 310
Helix 5	5	B	195	197	Right-handed 310
Helix 6	6	C	124	130	Right-handed alpha
Helix 7	7	D	56	63	Right-handed alpha
Helix 8	8	D	97	105	Right-handed alpha
Helix 9	9	D	118	123	Right-handed alpha
Helix 10	10	D	185	193	Right-handed alpha
Helix 11	11	E	27	31	Right-handed 310
Helix 12	12	E	86	90	Right-handed 310
Helix 13	13	E	195	197	Right-handed 310
Helix 14	14	F	124	131	Right-handed alpha
Helix 15	15	G	56	63	Right-handed alpha
Helix 16	16	G	84	88	Right-handed 310
Helix 17	17	G	97	105	Right-handed alpha
Helix 18	18	G	184	193	Right-handed alpha
Helix 19	19	I	124	129	Right-handed alpha
Helix 20	20	J	56	61	Right-handed alpha
Helix 21	21	J	97	105	Right-handed alpha
Helix 22	22	J	184	193	Right-handed alpha
Helix 23	23	K	27	31	Right-handed 310
Helix 24	24	K	86	90	Right-handed 310
Helix 25	25	K	164	168	Right-handed 310
Helix 26	26	K	193	197	Right-handed 310
Helix 27	27	L	52	56	Right-handed 310
Helix 28	28	L	124	130	Right-handed alpha

There are 57 sheets in PDB entry 4LVH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC, BD, BE,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	76	first strand
Strand 2	A	108	109	anti-parallel
Strand 3	A	253	259	anti-parallel
Strand 4	A	172	181	anti-parallel
Strand 5	A	113	115	first strand

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	95	first strand
Strand 2	A	226	234	parallel
Strand 3	A	172	181	anti-parallel
Strand 4	A	253	259	anti-parallel
Strand 5	A	248	251	first strand
Strand 6	A	148	150	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	201	first strand
Strand 2	A	208	210	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	4	first strand
Strand 2	B	23	24	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	19	first strand
Strand 2	B	80	82	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	48	first strand
Strand 2	B	33	38	anti-parallel
Strand 3	B	91	97	anti-parallel
Strand 4	B	116	117	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	72	first strand
Strand 2	B	77	78	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	132	first strand
Strand 2	B	147	151	anti-parallel
Strand 3	B	187	189	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	144	first strand
Strand 2	B	192	193	anti-parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	161	first strand
Strand 2	B	205	208	anti-parallel
Strand 3	B	213	216	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	177	first strand
Strand 2	B	184	185	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	12	first strand
Strand 2	C	108	109	parallel

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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	23	first strand
Strand 2	C	73	78	anti-parallel
Strand 3	C	65	68	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	57	first strand
Strand 2	C	45	52	anti-parallel
Strand 3	C	37	42	anti-parallel
Strand 4	C	89	90	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	132	138	first strand
Strand 2	C	177	183	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	147	151	first strand
Strand 2	C	193	197	anti-parallel
Strand 3	C	204	205	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	115	first strand
Strand 2	D	253	259	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	137	138	first strand
Strand 2	D	141	142	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	166	first strand
Strand 2	D	239	244	anti-parallel
Strand 3	D	199	202	anti-parallel
Strand 4	D	208	210	anti-parallel

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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	226	234	first strand
Strand 2	D	173	181	anti-parallel
Strand 3	D	248	249	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	11	first strand
Strand 2	E	115	119	parallel
Strand 3	E	91	98	anti-parallel
Strand 4	E	33	38	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	11	first strand
Strand 2	E	115	119	parallel
Strand 3	E	91	98	anti-parallel
Strand 4	E	108	111	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	17	22	first strand
Strand 2	E	77	82	anti-parallel
Strand 3	E	71	72	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	128	132	first strand
Strand 2	E	143	153	anti-parallel
Strand 3	E	184	193	anti-parallel
Strand 4	E	176	177	anti-parallel

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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	161	first strand
Strand 2	E	205	208	anti-parallel
Strand 3	E	213	215	anti-parallel

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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	18	21	first strand
Strand 2	F	74	78	anti-parallel
Strand 3	F	65	69	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	57	first strand
Strand 2	F	47	52	anti-parallel
Strand 3	F	38	41	anti-parallel
Strand 4	F	89	91	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	119	121	first strand
Strand 2	F	132	138	anti-parallel
Strand 3	F	176	183	anti-parallel
Strand 4	F	165	166	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	147	151	first strand
Strand 2	F	193	197	anti-parallel
Strand 3	F	204	205	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	51	52	first strand
Strand 2	G	80	81	parallel

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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	93	95	first strand
Strand 2	G	226	234	parallel
Strand 3	G	172	181	anti-parallel
Strand 4	G	253	259	anti-parallel
Strand 5	G	108	115	anti-parallel

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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	93	95	first strand
Strand 2	G	226	234	parallel
Strand 3	G	172	181	anti-parallel
Strand 4	G	248	251	anti-parallel
Strand 5	G	148	150	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	133	137	first strand
Strand 2	G	142	143	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	199	202	first strand
Strand 2	G	207	210	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	6	first strand
Strand 2	H	17	22	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	115	119	parallel
Strand 3	H	91	99	anti-parallel
Strand 4	H	33	38	anti-parallel

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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	115	119	parallel
Strand 3	H	91	99	anti-parallel
Strand 4	H	107	109	anti-parallel

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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	128	130	first strand
Strand 2	H	143	153	anti-parallel
Strand 3	H	184	193	anti-parallel
Strand 4	H	176	177	anti-parallel

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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	159	161	first strand
Strand 2	H	205	207	anti-parallel

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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	18	21	first strand
Strand 2	I	75	78	anti-parallel
Strand 3	I	66	68	anti-parallel

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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	56	57	first strand
Strand 2	I	49	52	anti-parallel
Strand 3	I	37	39	anti-parallel
Strand 4	I	90	92	anti-parallel

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There are 3 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	118	119	first strand
Strand 2	I	132	139	anti-parallel
Strand 3	I	176	183	anti-parallel

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There are 2 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	147	151	first strand
Strand 2	I	193	197	anti-parallel

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There are 5 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	93	95	first strand
Strand 2	J	226	231	parallel
Strand 3	J	176	181	anti-parallel
Strand 4	J	248	251	anti-parallel
Strand 5	J	148	150	anti-parallel

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There are 3 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	108	114	first strand
Strand 2	J	254	259	anti-parallel
Strand 3	J	172	174	anti-parallel

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There are 4 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	161	165	first strand
Strand 2	J	240	244	anti-parallel
Strand 3	J	199	202	anti-parallel
Strand 4	J	207	210	anti-parallel

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There are 4 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	11	first strand
Strand 2	K	116	119	parallel
Strand 3	K	91	99	anti-parallel
Strand 4	K	33	38	anti-parallel

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There are 4 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	11	first strand
Strand 2	K	116	119	parallel
Strand 3	K	91	99	anti-parallel
Strand 4	K	107	108	anti-parallel

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There are 3 strands in AW sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	17	22	first strand
Strand 2	K	77	82	anti-parallel
Strand 3	K	70	72	anti-parallel

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There are 2 strands in AX sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	49	50	first strand
Strand 2	K	57	58	anti-parallel

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There are 3 strands in AY sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	128	132	first strand
Strand 2	K	147	151	anti-parallel
Strand 3	K	188	189	anti-parallel

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There are 3 strands in AZ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	159	160	first strand
Strand 2	K	206	208	anti-parallel
Strand 3	K	213	215	anti-parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	12	first strand
Strand 2	L	108	109	parallel

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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	20	23	first strand
Strand 2	L	73	78	anti-parallel
Strand 3	L	65	69	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	38	42	first strand
Strand 2	L	45	51	anti-parallel

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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	118	121	first strand
Strand 2	L	133	139	anti-parallel
Strand 3	L	176	182	anti-parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	147	148	first strand
Strand 2	L	196	197	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4LVH

Analysis of interatomic Contacts of Structural Units in PDB entry:
4LVH