Analysis of interatomic Contacts of Structural Units in PDB entry:
4LW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LW5 entry

There are 10 chains in PDB entry 4LW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 5LEU 64
A
 VAL 68THR 232
B
 GLU 5LEU 64
B
 VAL 68HIS 233
C
 GLY 4LEU 64
C
 VAL 68ILE 231
D
 GLU 6LEU 64
D
 VAL 68THR 232
E
 GLU 5LEU 64
E
 VAL 68THR 232
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 4LW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
56 61Right-handed 310
Helix 2
2
A
68 72Right-handed 310
Helix 3
3
A
75 81Right-handed 310
Helix 4
4
A
82 91Right-handed alpha
Helix 5
5
B
56 61Right-handed 310
Helix 6
6
B
68 72Right-handed 310
Helix 7
7
B
75 81Right-handed 310
Helix 8
8
B
82 89Right-handed alpha
Helix 9
9
C
5 9Right-handed 310
Helix 10
10
C
56 61Right-handed 310
Helix 11
11
C
68 72Right-handed 310
Helix 12
12
C
75 81Right-handed 310
Helix 13
13
C
82 91Right-handed alpha
Helix 14
14
D
56 61Right-handed 310
Helix 15
15
D
68 72Right-handed 310
Helix 16
16
D
75 81Right-handed 310
Helix 17
17
D
82 91Right-handed alpha
Helix 18
18
D
158 161Right-handed 310
Helix 19
19
E
5 9Right-handed 310
Helix 20
20
E
37 39Right-handed 310
Helix 21
21
E
56 61Right-handed 310
Helix 22
22
E
68 72Right-handed 310
Helix 23
23
E
75 81Right-handed 310
Helix 24
24
E
82 90Right-handed alpha
Helix 25
25
E
158 161Right-handed 310
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There are 5 sheets in PDB entry 4LW5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 22first strand
Strand 2
A
25 36anti-parallel
Strand 3
A
41 48anti-parallel
Strand 4
A
219 229anti-parallel
Strand 5
A
201 210anti-parallel
Strand 6
A
150 156anti-parallel
Strand 7
A
163 172anti-parallel
Strand 8
A
178 189anti-parallel
Strand 9
A
94 102anti-parallel
Strand 10
A
107 117anti-parallel
Strand 11
A
120 130anti-parallel
Strand 12
A
12 22parallel
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There are 12 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 22first strand
Strand 2
B
25 36anti-parallel
Strand 3
B
41 48anti-parallel
Strand 4
B
219 229anti-parallel
Strand 5
B
201 210anti-parallel
Strand 6
B
150 157anti-parallel
Strand 7
B
162 172anti-parallel
Strand 8
B
178 189anti-parallel
Strand 9
B
94 102anti-parallel
Strand 10
B
107 117anti-parallel
Strand 11
B
120 130anti-parallel
Strand 12
B
12 22parallel
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There are 12 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 22first strand
Strand 2
C
25 36anti-parallel
Strand 3
C
41 48anti-parallel
Strand 4
C
219 229anti-parallel
Strand 5
C
201 210anti-parallel
Strand 6
C
151 157anti-parallel
Strand 7
C
162 172anti-parallel
Strand 8
C
178 189anti-parallel
Strand 9
C
94 102anti-parallel
Strand 10
C
107 117anti-parallel
Strand 11
C
120 130anti-parallel
Strand 12
C
12 22parallel
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There are 12 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 22first strand
Strand 2
D
25 36anti-parallel
Strand 3
D
41 48anti-parallel
Strand 4
D
219 229anti-parallel
Strand 5
D
201 210anti-parallel
Strand 6
D
151 157anti-parallel
Strand 7
D
162 172anti-parallel
Strand 8
D
178 189anti-parallel
Strand 9
D
94 102anti-parallel
Strand 10
D
107 117anti-parallel
Strand 11
D
120 130anti-parallel
Strand 12
D
12 22parallel
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There are 12 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
12 22first strand
Strand 2
E
25 36anti-parallel
Strand 3
E
41 48anti-parallel
Strand 4
E
219 229anti-parallel
Strand 5
E
201 210anti-parallel
Strand 6
E
151 157anti-parallel
Strand 7
E
162 172anti-parallel
Strand 8
E
178 189anti-parallel
Strand 9
E
94 102anti-parallel
Strand 10
E
107 117anti-parallel
Strand 11
E
120 130anti-parallel
Strand 12
E
12 22parallel
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