Analysis of interatomic Contacts of Structural Units in PDB entry:
4LWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LWZ entry

There are 4 chains in PDB entry 4LWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7TYR 173
B
 VAL 1457VAL 1848
C
 TYR 10ILE 172
D
 SER 1454VAL 1848
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 4LWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 34Right-handed alpha
Helix 2
2
A
75 82Right-handed alpha
Helix 3
3
A
95 101Right-handed alpha
Helix 4
4
A
101 113Right-handed alpha
Helix 5
5
A
128 132Right-handed 310
Helix 6
6
A
135 146Right-handed alpha
Helix 7
7
A
160 173Right-handed alpha
Helix 8
8
B
1473 1475Right-handed 310
Helix 9
9
B
1476 1485Right-handed alpha
Helix 10
10
B
1489 1494Right-handed 310
Helix 11
11
B
1499 1515Right-handed alpha
Helix 12
12
B
1517 1539Right-handed alpha
Helix 13
13
B
1542 1563Right-handed alpha
Helix 14
14
B
1566 1570Right-handed 310
Helix 15
15
B
1574 1579Right-handed alpha
Helix 16
16
B
1587 1614Right-handed alpha
Helix 17
17
B
1616 1622Right-handed alpha
Helix 18
18
B
1653 1671Right-handed alpha
Helix 19
19
B
1674 1698Right-handed alpha
Helix 20
20
B
1705 1726Right-handed alpha
Helix 21
21
B
1733 1736Right-handed 310
Helix 22
22
B
1737 1747Right-handed alpha
Helix 23
23
B
1753 1764Right-handed alpha
Helix 24
24
B
1768 1778Right-handed alpha
Helix 25
25
B
1790 1801Right-handed alpha
Helix 26
26
B
1802 1804Right-handed 310
Helix 27
27
B
1830 1834Right-handed 310
Helix 28
28
B
1837 1841Right-handed 310
Helix 29
29
C
23 34Right-handed alpha
Helix 30
30
C
78 82Right-handed alpha
Helix 31
31
C
95 101Right-handed alpha
Helix 32
32
C
101 113Right-handed alpha
Helix 33
33
C
128 132Right-handed 310
Helix 34
34
C
135 147Right-handed alpha
Helix 35
35
C
160 172Right-handed alpha
Helix 36
36
D
1473 1475Right-handed 310
Helix 37
37
D
1476 1485Right-handed alpha
Helix 38
38
D
1489 1494Right-handed 310
Helix 39
39
D
1499 1515Right-handed alpha
Helix 40
40
D
1517 1539Right-handed alpha
Helix 41
41
D
1542 1563Right-handed alpha
Helix 42
42
D
1566 1571Right-handed alpha
Helix 43
43
D
1576 1581Right-handed 310
Helix 44
44
D
1587 1614Right-handed alpha
Helix 45
45
D
1653 1671Right-handed alpha
Helix 46
46
D
1674 1695Right-handed alpha
Helix 47
47
D
1705 1726Right-handed alpha
Helix 48
48
D
1732 1737Right-handed alpha
Helix 49
49
D
1737 1747Right-handed alpha
Helix 50
50
D
1753 1764Right-handed alpha
Helix 51
51
D
1769 1778Right-handed alpha
Helix 52
52
D
1790 1801Right-handed alpha
Helix 53
53
D
1830 1834Right-handed 310
Helix 54
54
D
1837 1841Right-handed 310
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There are 4 sheets in PDB entry 4LWZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 55first strand
Strand 2
A
58 67anti-parallel
Strand 3
A
10 17parallel
Strand 4
A
86 92parallel
Strand 5
A
118 124parallel
Strand 6
A
149 152parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1470 1471first strand
Strand 2
B
1846 1847anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 54first strand
Strand 2
C
59 67anti-parallel
Strand 3
C
12 17parallel
Strand 4
C
86 92parallel
Strand 5
C
118 124parallel
Strand 6
C
149 152parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1470 1471first strand
Strand 2
D
1846 1847anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il