Analysis of interatomic Contacts of Structural Units in PDB entry:
4LXR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LXR entry

There are 3 chains in PDB entry 4LXR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 28PRO 800
J
 ASP 5HIS 110
K
 VAL 1LEU 107
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4LXR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 37Right-handed alpha
Helix 2
2
A
83 90Right-handed 310
Helix 3
3
A
114 122Right-handed alpha
Helix 4
4
A
142 147Right-handed 310
Helix 5
5
A
189 194Right-handed 310
Helix 6
6
A
216 220Right-handed 310
Helix 7
7
A
237 242Right-handed 310
Helix 8
8
A
455 461Right-handed alpha
Helix 9
9
A
467 472Right-handed 310
Helix 10
10
A
489 495Right-handed alpha
Helix 11
11
A
513 518Right-handed 310
Helix 12
12
A
566 568Right-handed 310
Helix 13
13
A
569 577Right-handed alpha
Helix 14
14
A
583 586Right-handed 310
Helix 15
15
A
607 611Right-handed 310
Helix 16
16
A
612 615Right-handed 310
Helix 17
17
A
690 694Right-handed 310
Helix 18
18
A
708 712Right-handed 310
Helix 19
19
A
730 738Right-handed alpha
Helix 20
20
A
756 758Right-handed 310
Helix 21
21
A
759 768Right-handed alpha
Helix 22
22
A
775 778Right-handed 310
Helix 23
23
A
791 793Right-handed 310
Helix 24
24
A
794 799Right-handed alpha
Helix 25
25
J
56 60Right-handed 310
Helix 26
26
K
61 65Right-handed 310
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There are 11 sheets in PDB entry 4LXR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 48first strand
Strand 2
A
51 56anti-parallel
Strand 3
A
65 70anti-parallel
Strand 4
A
72 79anti-parallel
Strand 5
A
97 105parallel
Strand 6
A
124 125parallel
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There are 24 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 48first strand
Strand 2
A
51 56anti-parallel
Strand 3
A
65 70anti-parallel
Strand 4
A
72 79anti-parallel
Strand 5
A
97 105parallel
Strand 6
A
129 133parallel
Strand 7
A
154 158parallel
Strand 8
A
178 182parallel
Strand 9
A
201 203parallel
Strand 10
A
225 227parallel
Strand 11
A
249 251parallel
Strand 12
A
273 275parallel
Strand 13
A
297 300parallel
Strand 14
A
323 326parallel
Strand 15
A
346 348parallel
Strand 16
A
370 372parallel
Strand 17
A
394 396parallel
Strand 18
A
418 420parallel
Strand 19
A
442 444parallel
Strand 20
A
477 479parallel
Strand 21
A
501 503parallel
Strand 22
A
526 528parallel
Strand 23
A
554 557parallel
Strand 24
A
588 591parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 405first strand
Strand 2
A
428 429parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 512first strand
Strand 2
A
536 537parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 564first strand
Strand 2
A
597 599parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
617 619first strand
Strand 2
A
636 640anti-parallel
Strand 3
A
645 649anti-parallel
Strand 4
A
670 674parallel
Strand 5
A
696 698parallel
Strand 6
A
718 720parallel
Strand 7
A
745 747parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
780 781first strand
Strand 2
A
788 789anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
12 16first strand
Strand 2
J
43 47anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
65 73first strand
Strand 2
J
95 105anti-parallel
Strand 3
K
5 7anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
12 16first strand
Strand 2
K
43 47anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
67 73first strand
Strand 2
K
95 102anti-parallel
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