Analysis of interatomic Contacts of Structural Units in PDB entry:
4LZJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LZJ entry

There are 4 chains in PDB entry 4LZJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 11LYS 303
B
 ASP 3LEU 301
C
 LEU 9HIS 293
D
 LEU 6SER 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 4LZJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 16Right-handed 310
Helix 2
2
A
18 22Right-handed 310
Helix 3
3
A
23 27Right-handed 310
Helix 4
4
A
28 41Right-handed alpha
Helix 5
5
A
41 49Right-handed alpha
Helix 6
6
A
50 67Right-handed alpha
Helix 7
7
A
76 89Right-handed alpha
Helix 8
8
A
89 95Right-handed alpha
Helix 9
9
A
108 113Right-handed 310
Helix 10
10
A
118 122Right-handed 310
Helix 11
11
A
124 132Right-handed alpha
Helix 12
12
A
150 163Right-handed alpha
Helix 13
13
A
176 182Right-handed alpha
Helix 14
14
A
201 222Right-handed alpha
Helix 15
15
A
237 253Right-handed alpha
Helix 16
16
A
255 266Right-handed alpha
Helix 17
17
A
269 280Right-handed alpha
Helix 18
18
A
282 293Right-handed alpha
Helix 19
19
A
296 303Right-handed alpha
Helix 20
20
B
4 11Right-handed alpha
Helix 21
21
B
12 16Right-handed 310
Helix 22
22
B
18 22Right-handed 310
Helix 23
23
B
23 27Right-handed 310
Helix 24
24
B
28 41Right-handed alpha
Helix 25
25
B
41 67Right-handed alpha
Helix 26
26
B
76 89Right-handed alpha
Helix 27
27
B
89 95Right-handed alpha
Helix 28
28
B
107 112Right-handed 310
Helix 29
29
B
118 122Right-handed 310
Helix 30
30
B
124 133Right-handed alpha
Helix 31
31
B
150 163Right-handed alpha
Helix 32
32
B
176 182Right-handed alpha
Helix 33
33
B
201 222Right-handed alpha
Helix 34
34
B
237 253Right-handed alpha
Helix 35
35
B
255 266Right-handed alpha
Helix 36
36
B
269 280Right-handed alpha
Helix 37
37
B
288 293Right-handed alpha
Helix 38
38
C
12 16Right-handed 310
Helix 39
39
C
18 22Right-handed 310
Helix 40
40
C
23 27Right-handed 310
Helix 41
41
C
28 49Right-handed alpha
Helix 42
42
C
50 67Right-handed alpha
Helix 43
43
C
76 89Right-handed alpha
Helix 44
44
C
89 95Right-handed alpha
Helix 45
45
C
108 113Right-handed 310
Helix 46
46
C
122 132Right-handed alpha
Helix 47
47
C
150 163Right-handed alpha
Helix 48
48
C
176 182Right-handed alpha
Helix 49
49
C
201 222Right-handed alpha
Helix 50
50
C
237 253Right-handed alpha
Helix 51
51
C
255 266Right-handed alpha
Helix 52
52
C
269 279Right-handed alpha
Helix 53
53
D
12 16Right-handed 310
Helix 54
54
D
18 22Right-handed 310
Helix 55
55
D
28 49Right-handed alpha
Helix 56
56
D
50 67Right-handed alpha
Helix 57
57
D
76 95Right-handed alpha
Helix 58
58
D
107 113Right-handed 310
Helix 59
59
D
118 122Right-handed 310
Helix 60
60
D
124 133Right-handed alpha
Helix 61
61
D
150 163Right-handed alpha
Helix 62
62
D
176 182Right-handed alpha
Helix 63
63
D
201 222Right-handed alpha
Helix 64
64
D
237 253Right-handed alpha
Helix 65
65
D
255 266Right-handed alpha
Helix 66
66
D
269 280Right-handed alpha
Helix 67
67
D
282 292Right-handed alpha
Helix 68
68
D
296 301Right-handed alpha
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There are 5 sheets in PDB entry 4LZJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 105first strand
Strand 2
A
71 75parallel
Strand 3
A
140 144parallel
Strand 4
A
166 171parallel
Strand 5
A
184 187parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 105first strand
Strand 2
B
71 75parallel
Strand 3
B
140 144parallel
Strand 4
B
166 171parallel
Strand 5
B
184 187parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
101 105first strand
Strand 2
C
71 75parallel
Strand 3
C
140 144parallel
Strand 4
C
167 171parallel
Strand 5
C
184 187parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
101 105first strand
Strand 2
D
71 75parallel
Strand 3
D
140 144parallel
Strand 4
D
166 171parallel
Strand 5
D
184 187parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
225 226first strand
Strand 2
D
229 230anti-parallel
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