Analysis of interatomic Contacts of Structural Units in PDB entry:
4M0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M0C entry

There are 2 chains in PDB entry 4M0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ASN 212
B
 ASN 2ASN 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4M0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 35Right-handed alpha
Helix 2
2
A
55 68Right-handed alpha
Helix 3
3
A
72 91Right-handed alpha
Helix 4
4
A
107 118Right-handed alpha
Helix 5
5
A
155 161Right-handed alpha
Helix 6
6
A
161 175Right-handed alpha
Helix 7
7
A
191 212Right-handed alpha
Helix 8
8
B
18 35Right-handed alpha
Helix 9
9
B
47 49Right-handed 310
Helix 10
10
B
55 68Right-handed alpha
Helix 11
11
B
72 91Right-handed alpha
Helix 12
12
B
107 118Right-handed alpha
Helix 13
13
B
155 160Right-handed alpha
Helix 14
14
B
161 175Right-handed alpha
Helix 15
15
B
191 212Right-handed alpha
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There are 4 sheets in PDB entry 4M0C. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 45first strand
Strand 2
A
2 8parallel
Strand 3
A
94 100parallel
Strand 4
A
140 147parallel
Strand 5
A
178 185parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
131 133anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 45first strand
Strand 2
B
3 8parallel
Strand 3
B
94 100parallel
Strand 4
B
140 147parallel
Strand 5
B
178 185parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 125first strand
Strand 2
B
132 133anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il