Analysis of interatomic Contacts of Structural Units in PDB entry:
4M0G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M0G entry

There are 2 chains in PDB entry 4M0G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0ALA 429
B
 MSE 1GLU 428
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 39 helices in PDB entry 4M0G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 27Right-handed alpha
Helix 2
2
A
56 61Right-handed 310
Helix 3
3
A
75 88Right-handed alpha
Helix 4
4
A
106 120Right-handed alpha
Helix 5
5
A
131 141Right-handed alpha
Helix 6
6
A
146 151Right-handed alpha
Helix 7
7
A
152 174Right-handed alpha
Helix 8
8
A
181 184Right-handed 310
Helix 9
9
A
185 197Right-handed alpha
Helix 10
10
A
202 213Right-handed alpha
Helix 11
11
A
224 228Right-handed 310
Helix 12
12
A
244 252Right-handed alpha
Helix 13
13
A
254 258Right-handed 310
Helix 14
14
A
283 294Right-handed alpha
Helix 15
15
A
311 322Right-handed alpha
Helix 16
16
A
330 335Right-handed 310
Helix 17
17
A
359 364Right-handed alpha
Helix 18
18
A
385 389Right-handed 310
Helix 19
19
A
390 405Right-handed alpha
Helix 20
20
A
416 418Right-handed 310
Helix 21
21
B
15 27Right-handed alpha
Helix 22
22
B
56 61Right-handed 310
Helix 23
23
B
75 88Right-handed alpha
Helix 24
24
B
106 120Right-handed alpha
Helix 25
25
B
131 141Right-handed alpha
Helix 26
26
B
146 151Right-handed alpha
Helix 27
27
B
152 174Right-handed alpha
Helix 28
28
B
181 197Right-handed alpha
Helix 29
29
B
202 213Right-handed alpha
Helix 30
30
B
224 228Right-handed 310
Helix 31
31
B
245 252Right-handed alpha
Helix 32
32
B
254 258Right-handed 310
Helix 33
33
B
283 293Right-handed alpha
Helix 34
34
B
311 322Right-handed alpha
Helix 35
35
B
330 335Right-handed 310
Helix 36
36
B
359 364Right-handed alpha
Helix 37
37
B
385 389Right-handed 310
Helix 38
38
B
390 405Right-handed alpha
Helix 39
39
B
416 418Right-handed 310
Back to top of page

There are 11 sheets in PDB entry 4M0G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
96 99parallel
Strand 3
A
65 68parallel
Strand 4
A
29 32parallel
Strand 5
A
217 220parallel
Strand 6
A
3 8parallel
Strand 7
A
260 266parallel
Strand 8
A
325 329parallel
Strand 9
A
407 412parallel
Strand 10
A
420 422anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 43first strand
Strand 2
A
50 52anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 74first strand
Strand 2
A
103 104parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 271first strand
Strand 2
A
305 310anti-parallel
Strand 3
A
339 348parallel
Strand 4
A
351 353anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 271first strand
Strand 2
A
305 310anti-parallel
Strand 3
A
339 348parallel
Strand 4
A
367 374anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 201first strand
Strand 2
B
96 99parallel
Strand 3
B
65 68parallel
Strand 4
B
29 32parallel
Strand 5
B
217 220parallel
Strand 6
B
3 8parallel
Strand 7
B
260 266parallel
Strand 8
B
325 329parallel
Strand 9
B
408 412parallel
Strand 10
B
420 422anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 43first strand
Strand 2
B
50 51anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 74first strand
Strand 2
B
103 104parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 271first strand
Strand 2
B
305 307anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 310first strand
Strand 2
B
339 348parallel
Strand 3
B
351 353anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 310first strand
Strand 2
B
339 348parallel
Strand 3
B
367 374anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il