Analysis of interatomic Contacts of Structural Units in PDB entry:
4M0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M0X entry

There are 2 chains in PDB entry 4M0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3ASP 371
B
 MET 1ARG 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 31 helices in PDB entry 4M0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
62 73Right-handed alpha
Helix 2
2
A
74 78Right-handed 310
Helix 3
3
A
85 97Right-handed alpha
Helix 4
4
A
100 119Right-handed alpha
Helix 5
5
A
122 127Right-handed alpha
Helix 6
6
A
145 160Right-handed alpha
Helix 7
7
A
172 184Right-handed alpha
Helix 8
8
A
185 187Right-handed 310
Helix 9
9
A
202 216Right-handed alpha
Helix 10
10
A
229 240Right-handed alpha
Helix 11
11
A
252 263Right-handed alpha
Helix 12
12
A
272 276Right-handed 310
Helix 13
13
A
277 291Right-handed alpha
Helix 14
14
A
303 317Right-handed alpha
Helix 15
15
A
328 332Right-handed 310
Helix 16
16
A
361 369Right-handed alpha
Helix 17
17
B
62 73Right-handed alpha
Helix 18
18
B
74 78Right-handed 310
Helix 19
19
B
85 97Right-handed alpha
Helix 20
20
B
100 120Right-handed alpha
Helix 21
21
B
122 127Right-handed alpha
Helix 22
22
B
145 159Right-handed alpha
Helix 23
23
B
172 185Right-handed alpha
Helix 24
24
B
202 216Right-handed alpha
Helix 25
25
B
229 240Right-handed alpha
Helix 26
26
B
252 262Right-handed alpha
Helix 27
27
B
271 276Right-handed alpha
Helix 28
28
B
277 292Right-handed alpha
Helix 29
29
B
303 317Right-handed alpha
Helix 30
30
B
327 332Right-handed 310
Helix 31
31
B
361 369Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 4M0X. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 22first strand
Strand 2
A
27 40anti-parallel
Strand 3
A
45 51anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 136first strand
Strand 2
A
347 349anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 141first strand
Strand 2
A
163 167parallel
Strand 3
A
192 196parallel
Strand 4
A
220 222parallel
Strand 5
A
244 246parallel
Strand 6
A
267 270parallel
Strand 7
A
294 297parallel
Strand 8
A
323 324parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 16first strand
Strand 2
B
30 40anti-parallel
Strand 3
B
45 51anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 136first strand
Strand 2
B
347 349anti-parallel
Strand 3
B
343 344anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 141first strand
Strand 2
B
163 167parallel
Strand 3
B
192 196parallel
Strand 4
B
220 222parallel
Strand 5
B
244 246parallel
Strand 6
B
267 270parallel
Strand 7
B
294 297parallel
Strand 8
B
323 324parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il