Analysis of interatomic Contacts of Structural Units in PDB entry:
4M1M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M1M entry

There are 2 chains in PDB entry 4M1M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 30ALA 1271
B
 PRO 31TRP 132
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 99 helices in PDB entry 4M1M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 39Right-handed alpha
Helix 2
2
A
43 62Right-handed alpha
Helix 3
3
A
62 87Right-handed alpha
Helix 4
4
A
99 154Right-handed alpha
Helix 5
5
A
155 161Right-handed alpha
Helix 6
6
A
163 180Right-handed alpha
Helix 7
7
A
183 207Right-handed alpha
Helix 8
8
A
208 218Right-handed alpha
Helix 9
9
A
218 264Right-handed alpha
Helix 10
10
A
265 275Right-handed alpha
Helix 11
11
A
276 319Right-handed alpha
Helix 12
12
A
323 367Right-handed alpha
Helix 13
13
A
427 437Right-handed alpha
Helix 14
14
A
455 457Right-handed 310
Helix 15
15
A
458 465Right-handed alpha
Helix 16
16
A
479 486Right-handed alpha
Helix 17
17
A
492 502Right-handed alpha
Helix 18
18
A
505 512Right-handed alpha
Helix 19
19
A
514 518Right-handed 310
Helix 20
20
A
528 543Right-handed alpha
Helix 21
21
A
558 573Right-handed alpha
Helix 22
22
A
607 614Right-handed alpha
Helix 23
23
A
616 625Right-handed alpha
Helix 24
24
A
682 688Right-handed alpha
Helix 25
25
A
696 701Right-handed alpha
Helix 26
26
A
703 737Right-handed alpha
Helix 27
27
A
741 795Right-handed alpha
Helix 28
28
A
796 801Right-handed alpha
Helix 29
29
A
806 816Right-handed alpha
Helix 30
30
A
819 824Right-handed 310
Helix 31
31
A
825 850Right-handed alpha
Helix 32
32
A
851 885Right-handed alpha
Helix 33
33
A
886 899Right-handed alpha
Helix 34
34
A
899 904Right-handed alpha
Helix 35
35
A
908 926Right-handed alpha
Helix 36
36
A
926 962Right-handed alpha
Helix 37
37
A
967 991Right-handed alpha
Helix 38
38
A
993 1009Right-handed alpha
Helix 39
39
A
1071 1080Right-handed alpha
Helix 40
40
A
1098 1100Right-handed 310
Helix 41
41
A
1101 1108Right-handed alpha
Helix 42
42
A
1122 1129Right-handed alpha
Helix 43
43
A
1136 1148Right-handed alpha
Helix 44
44
A
1150 1157Right-handed alpha
Helix 45
45
A
1173 1188Right-handed alpha
Helix 46
46
A
1205 1219Right-handed alpha
Helix 47
47
A
1252 1259Right-handed alpha
Helix 48
48
A
1261 1267Right-handed alpha
Helix 49
49
B
34 39Right-handed alpha
Helix 50
50
B
40 42Right-handed 310
Helix 51
51
B
43 62Right-handed alpha
Helix 52
52
B
62 87Right-handed alpha
Helix 53
53
B
94 99Right-handed alpha
Helix 54
54
B
99 154Right-handed alpha
Helix 55
55
B
155 161Right-handed alpha
Helix 56
56
B
163 180Right-handed alpha
Helix 57
57
B
183 207Right-handed alpha
Helix 58
58
B
208 216Right-handed alpha
Helix 59
59
B
217 264Right-handed alpha
Helix 60
60
B
265 276Right-handed alpha
Helix 61
61
B
279 319Right-handed alpha
Helix 62
62
B
322 343Right-handed alpha
Helix 63
63
B
344 367Right-handed alpha
Helix 64
64
B
427 437Right-handed alpha
Helix 65
65
B
458 465Right-handed alpha
Helix 66
66
B
479 486Right-handed alpha
Helix 67
67
B
492 503Right-handed alpha
Helix 68
68
B
505 512Right-handed alpha
Helix 69
69
B
514 518Right-handed 310
Helix 70
70
B
528 544Right-handed alpha
Helix 71
71
B
558 573Right-handed alpha
Helix 72
72
B
607 614Right-handed alpha
Helix 73
73
B
616 625Right-handed alpha
Helix 74
74
B
696 700Right-handed 310
Helix 75
75
B
703 735Right-handed alpha
Helix 76
76
B
741 770Right-handed alpha
Helix 77
77
B
772 795Right-handed alpha
Helix 78
78
B
796 801Right-handed alpha
Helix 79
79
B
806 816Right-handed alpha
Helix 80
80
B
818 824Right-handed 310
Helix 81
81
B
825 850Right-handed alpha
Helix 82
82
B
851 885Right-handed alpha
Helix 83
83
B
886 899Right-handed alpha
Helix 84
84
B
899 904Right-handed alpha
Helix 85
85
B
908 920Right-handed alpha
Helix 86
86
B
920 926Right-handed alpha
Helix 87
87
B
926 963Right-handed alpha
Helix 88
88
B
967 989Right-handed alpha
Helix 89
89
B
993 1009Right-handed alpha
Helix 90
90
B
1071 1080Right-handed alpha
Helix 91
91
B
1098 1100Right-handed 310
Helix 92
92
B
1101 1108Right-handed alpha
Helix 93
93
B
1123 1129Right-handed alpha
Helix 94
94
B
1137 1148Right-handed alpha
Helix 95
95
B
1150 1156Right-handed alpha
Helix 96
96
B
1173 1188Right-handed alpha
Helix 97
97
B
1205 1215Right-handed alpha
Helix 98
98
B
1252 1260Right-handed alpha
Helix 99
99
B
1261 1267Right-handed alpha
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There are 12 sheets in PDB entry 4M1M. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 413first strand
Strand 2
A
388 395anti-parallel
Strand 3
A
444 449anti-parallel
Strand 4
A
452 453anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 469first strand
Strand 2
A
547 551parallel
Strand 3
A
577 581parallel
Strand 4
A
418 422parallel
Strand 5
A
593 598parallel
Strand 6
A
601 606anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1049 1050first strand
Strand 2
A
1031 1038anti-parallel
Strand 3
A
1054 1056anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1049 1050first strand
Strand 2
A
1031 1038anti-parallel
Strand 3
A
1087 1092anti-parallel
Strand 4
A
1095 1096anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1109 1112first strand
Strand 2
A
1192 1196parallel
Strand 3
A
1222 1226parallel
Strand 4
A
1061 1065parallel
Strand 5
A
1238 1243parallel
Strand 6
A
1246 1251anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
388 390first strand
Strand 2
B
411 413anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
466 469first strand
Strand 2
B
547 551parallel
Strand 3
B
577 581parallel
Strand 4
B
418 422parallel
Strand 5
B
593 596parallel
Strand 6
B
605 606anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
448 449first strand
Strand 2
B
452 453anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1049 1050first strand
Strand 2
B
1031 1038anti-parallel
Strand 3
B
1054 1056anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1049 1050first strand
Strand 2
B
1031 1038anti-parallel
Strand 3
B
1087 1092anti-parallel
Strand 4
B
1095 1096anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1109 1112first strand
Strand 2
B
1192 1196parallel
Strand 3
B
1222 1226parallel
Strand 4
B
1061 1066parallel
Strand 5
B
1238 1243parallel
Strand 6
B
1246 1251anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1121 1122first strand
Strand 2
B
1164 1165anti-parallel
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