Analysis of interatomic Contacts of Structural Units in PDB entry:
4M1R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M1R entry

There are 2 chains in PDB entry 4M1R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 296
B
 MET 1PRO 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 4M1R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 39Right-handed 310
Helix 2
2
A
40 52Right-handed alpha
Helix 3
3
A
73 88Right-handed alpha
Helix 4
4
A
100 103Right-handed 310
Helix 5
5
A
104 120Right-handed alpha
Helix 6
6
A
141 157Right-handed alpha
Helix 7
7
A
166 171Right-handed alpha
Helix 8
8
A
172 179Right-handed alpha
Helix 9
9
A
199 212Right-handed alpha
Helix 10
10
A
233 247Right-handed alpha
Helix 11
11
A
277 281Right-handed 310
Helix 12
12
A
282 294Right-handed alpha
Helix 13
13
B
35 39Right-handed 310
Helix 14
14
B
40 52Right-handed alpha
Helix 15
15
B
72 88Right-handed alpha
Helix 16
16
B
100 103Right-handed 310
Helix 17
17
B
104 120Right-handed alpha
Helix 18
18
B
141 157Right-handed alpha
Helix 19
19
B
166 171Right-handed alpha
Helix 20
20
B
172 177Right-handed alpha
Helix 21
21
B
199 212Right-handed alpha
Helix 22
22
B
233 247Right-handed alpha
Helix 23
23
B
277 281Right-handed 310
Helix 24
24
B
282 294Right-handed alpha
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There are 4 sheets in PDB entry 4M1R. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 8first strand
Strand 2
A
11 14anti-parallel
Strand 3
A
17 18anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 26first strand
Strand 2
A
55 61parallel
Strand 3
A
91 97parallel
Strand 4
A
125 128parallel
Strand 5
A
162 164parallel
Strand 6
A
187 194parallel
Strand 7
A
216 222parallel
Strand 8
A
251 256parallel
Strand 9
A
22 26parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 8first strand
Strand 2
B
11 14anti-parallel
Strand 3
B
17 18anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 28first strand
Strand 2
B
55 61parallel
Strand 3
B
91 97parallel
Strand 4
B
125 128parallel
Strand 5
B
162 164parallel
Strand 6
B
187 194parallel
Strand 7
B
216 222parallel
Strand 8
B
251 256parallel
Strand 9
B
22 28parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il