Analysis of interatomic Contacts of Structural Units in PDB entry:
4M3P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M3P entry

There are 4 chains in PDB entry 4M3P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 10GLN 401
B
 LYS 8PHE 403
C
 LYS 10LYS 400
D
 LYS 10PHE 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 4M3P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 19Right-handed alpha
Helix 2
2
A
28 36Right-handed alpha
Helix 3
3
A
47 52Right-handed alpha
Helix 4
4
A
52 67Right-handed alpha
Helix 5
5
A
96 112Right-handed alpha
Helix 6
6
A
133 152Right-handed alpha
Helix 7
7
A
163 176Right-handed alpha
Helix 8
8
A
197 208Right-handed alpha
Helix 9
9
A
220 238Right-handed alpha
Helix 10
10
A
260 264Right-handed 310
Helix 11
11
A
271 275Right-handed 310
Helix 12
12
A
277 291Right-handed alpha
Helix 13
13
A
303 314Right-handed alpha
Helix 14
14
A
314 319Right-handed alpha
Helix 15
15
A
322 328Right-handed 310
Helix 16
16
A
329 336Right-handed 310
Helix 17
17
A
340 345Right-handed alpha
Helix 18
18
A
348 355Right-handed alpha
Helix 19
19
A
376 401Right-handed alpha
Helix 20
20
B
12 19Right-handed alpha
Helix 21
21
B
28 36Right-handed alpha
Helix 22
22
B
47 52Right-handed alpha
Helix 23
23
B
52 67Right-handed alpha
Helix 24
24
B
96 112Right-handed alpha
Helix 25
25
B
134 151Right-handed alpha
Helix 26
26
B
163 176Right-handed alpha
Helix 27
27
B
197 208Right-handed alpha
Helix 28
28
B
220 238Right-handed alpha
Helix 29
29
B
260 264Right-handed 310
Helix 30
30
B
271 275Right-handed 310
Helix 31
31
B
277 292Right-handed alpha
Helix 32
32
B
303 314Right-handed alpha
Helix 33
33
B
314 319Right-handed alpha
Helix 34
34
B
322 328Right-handed 310
Helix 35
35
B
329 336Right-handed 310
Helix 36
36
B
340 345Right-handed alpha
Helix 37
37
B
348 355Right-handed alpha
Helix 38
38
B
378 403Right-handed alpha
Helix 39
39
C
12 19Right-handed alpha
Helix 40
40
C
28 37Right-handed alpha
Helix 41
41
C
47 52Right-handed alpha
Helix 42
42
C
52 67Right-handed alpha
Helix 43
43
C
95 112Right-handed alpha
Helix 44
44
C
133 151Right-handed alpha
Helix 45
45
C
163 176Right-handed alpha
Helix 46
46
C
197 208Right-handed alpha
Helix 47
47
C
220 238Right-handed alpha
Helix 48
48
C
260 264Right-handed 310
Helix 49
49
C
271 275Right-handed 310
Helix 50
50
C
277 292Right-handed alpha
Helix 51
51
C
303 314Right-handed alpha
Helix 52
52
C
314 319Right-handed alpha
Helix 53
53
C
322 328Right-handed 310
Helix 54
54
C
329 336Right-handed 310
Helix 55
55
C
340 345Right-handed alpha
Helix 56
56
C
348 355Right-handed alpha
Helix 57
57
C
396 400Right-handed 310
Helix 58
58
D
12 19Right-handed alpha
Helix 59
59
D
28 37Right-handed alpha
Helix 60
60
D
47 52Right-handed alpha
Helix 61
61
D
52 67Right-handed alpha
Helix 62
62
D
96 112Right-handed alpha
Helix 63
63
D
133 152Right-handed alpha
Helix 64
64
D
163 176Right-handed alpha
Helix 65
65
D
197 208Right-handed alpha
Helix 66
66
D
220 237Right-handed alpha
Helix 67
67
D
260 264Right-handed 310
Helix 68
68
D
271 275Right-handed 310
Helix 69
69
D
277 292Right-handed alpha
Helix 70
70
D
303 314Right-handed alpha
Helix 71
71
D
314 319Right-handed alpha
Helix 72
72
D
322 328Right-handed 310
Helix 73
73
D
329 336Right-handed 310
Helix 74
74
D
340 345Right-handed alpha
Helix 75
75
D
348 355Right-handed alpha
Helix 76
76
D
381 400Right-handed alpha
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There are 4 sheets in PDB entry 4M3P. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
293 296parallel
Strand 3
A
243 247parallel
Strand 4
A
212 216parallel
Strand 5
A
181 185parallel
Strand 6
A
155 161parallel
Strand 7
A
117 123parallel
Strand 8
A
70 72parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 24first strand
Strand 2
B
293 296parallel
Strand 3
B
243 247parallel
Strand 4
B
212 216parallel
Strand 5
B
181 185parallel
Strand 6
B
155 161parallel
Strand 7
B
117 122parallel
Strand 8
B
70 72parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 24first strand
Strand 2
C
295 296parallel
Strand 3
C
243 247parallel
Strand 4
C
212 216parallel
Strand 5
C
181 185parallel
Strand 6
C
155 161parallel
Strand 7
C
117 123parallel
Strand 8
C
70 72parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
23 24first strand
Strand 2
D
293 296parallel
Strand 3
D
243 247parallel
Strand 4
D
212 216parallel
Strand 5
D
181 185parallel
Strand 6
D
155 161parallel
Strand 7
D
117 122parallel
Strand 8
D
70 72parallel
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