Analysis of interatomic Contacts of Structural Units in PDB entry:
4M5E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M5E entry

There is 1 chain in PDB entry 4M5E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2HIS 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4M5E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 13Right-handed alpha
Helix 2
2
A
22 36Right-handed alpha
Helix 3
3
A
38 49Right-handed alpha
Helix 4
4
A
50 59Right-handed alpha
Helix 5
5
A
61 76Right-handed alpha
Helix 6
6
A
79 91Right-handed alpha
Helix 7
7
A
92 94Right-handed 310
Helix 8
8
A
100 104Right-handed 310
Helix 9
9
A
107 125Right-handed alpha
Helix 10
10
A
146 151Right-handed alpha
Helix 11
11
A
153 157Right-handed 310
Helix 12
12
A
161 170Right-handed alpha
Helix 13
13
A
172 179Right-handed alpha
Helix 14
14
A
185 192Right-handed alpha
Helix 15
15
A
194 208Right-handed alpha
Helix 16
16
A
214 218Right-handed 310
Helix 17
17
A
224 237Right-handed alpha
Helix 18
18
A
239 253Right-handed alpha
Helix 19
19
A
255 268Right-handed alpha
Helix 20
20
A
283 289Right-handed alpha
Helix 21
21
A
297 304Right-handed alpha
Helix 22
22
A
305 314Right-handed alpha
Helix 23
23
A
315 336Right-handed alpha
Helix 24
24
A
337 341Right-handed 310
Helix 25
25
A
342 349Right-handed alpha
Helix 26
26
A
354 359Right-handed 310
Helix 27
27
A
360 364Right-handed 310
Helix 28
28
A
365 378Right-handed alpha
Helix 29
29
A
388 406Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4M5E.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 276first strand
Strand 2
A
281 282anti-parallel
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