Analysis of interatomic Contacts of Structural Units in PDB entry:
4M68


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M68 entry

There is 1 chain in PDB entry 4M68 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 182GLU 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4M68. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
187 191Right-handed 310
Helix 2
2
A
228 243Right-handed alpha
Helix 3
3
A
279 287Right-handed alpha
Helix 4
4
A
291 312Right-handed alpha
Helix 5
5
A
328 330Right-handed 310
Helix 6
6
A
339 348Right-handed alpha
Helix 7
7
A
359 363Right-handed alpha
Helix 8
8
A
365 371Right-handed alpha
Helix 9
9
A
377 395Right-handed alpha
Helix 10
10
A
403 413Right-handed alpha
Helix 11
11
A
425 436Right-handed alpha
Helix 12
12
A
439 443Right-handed 310
Helix 13
13
A
445 455Right-handed alpha
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There are 2 sheets in PDB entry 4M68. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 185first strand
Strand 2
A
254 260parallel
Strand 3
A
267 273anti-parallel
Strand 4
A
214 221anti-parallel
Strand 5
A
204 211anti-parallel
Strand 6
A
196 200anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 327first strand
Strand 2
A
331 334anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il